RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 AP3S1Q92572 193 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 MARVELD3Q96A59 401 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 IL4I1Q96RQ9 567 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 ANKRA2Q9H9E1 313 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 C12orf10Q9HB07 376 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 RBFOX1Q9NWB1 397 aaKnown RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 FTSJ1Q9UET6 329 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 IRAK3Q9Y616 596 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 UPK3BL1B0FP48 263 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 UPK3BL2E5RIL1 263 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 WWP2O00308 870 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 PCDH17O14917 1159 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 HCN1O60741 890 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 GCM2O75603 506 aaPredicted RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 OLFM2O95897 454 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 PRKAR1AP10644 381 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 SLC2A2P11168 524 aaPredicted RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 ITGALP20701 1170 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 CRATP43155 626 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 MLLT11Q13015 90 aaPredicted RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 NFATC2Q13469 925 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 PTCHD3Q3KNS1 767 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 SLC51BQ86UW2 128 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 TMC8Q8IU68 726 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 ATP6V1C2Q8NEY4 427 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 SPPL3Q8TCT6 385 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 ZC3HAV1LQ96H79 300 aaKnown RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 PIP5K1AQ99755 562 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 HDHD5Q9BXW7 423 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 MCUBQ9NWR8 336 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 NDRG2Q9UN36 371 aaKnown RBP14.75□□□□□ -0.05
LIMS2-205ENST00000409455 PCDHB9Q9Y5E1 797 aa14.75□□□□□ -0.05
LIMS2-205ENST00000409455 C1orf226A1L170 272 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 J3KTA2 159 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MYL12BO14950 172 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 YY2O15391 372 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 PCDH7O60245 1069 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GREM1O60565 184 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CLDN11O75508 207 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GADD45GO95257 159 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MYOGP15173 224 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 FRMPD2BQ6IN97 320 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 KLHL17Q6TDP4 642 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 PHC2Q8IXK0 858 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 C1orf52Q8N6N3 182 aaKnown RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 L3MBTL4Q8NA19 623 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 EID2BQ96D98 161 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 FCRL1Q96LA6 429 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 HTATIP2Q9BUP3 242 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 SLC25A19Q9HC21 320 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 C11orf16Q9NQ32 467 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 TXNL4BQ9NX01 149 aaKnown RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 PLEKHB1Q9UF11 243 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 TMCC3Q9ULS5 477 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CHD5Q8TDI0 1954 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 FAM240BA0A1B0GVZ2 78 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 A0A1W2PRU2 124 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 LINC01553A4QN01 128 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CDK2AP1O14519 115 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 PLD2O14939 933 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CCL16O15467 120 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 PDPK1O15530 556 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MYL12AP19105 171 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 SLC9A3P48764 834 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MAPK12P53778 367 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 RAB25P57735 213 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 FOXD4Q12950 439 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 ZNF177Q13360 481 aaPredicted RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GAB1Q13480 694 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CDKL4Q5MAI5 379 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 CPTPQ5TA50 214 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 LAMTOR1Q6IAA8 161 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GLRX5Q86SX6 157 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GRAMD2AQ8IUY3 354 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 TAGAPQ8N103 731 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 GEMIN6Q8WXD5 167 aaKnown RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 MRPS31Q92665 395 aaKnown RBP14.74□□□□□ -0.05
LIMS2-205ENST00000409455 HYLS1Q96M11 299 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 SLC23A1Q9UHI7 598 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 BTNL2Q9UIR0 455 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 STOML2Q9UJZ1 356 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 ALPK3Q96L96 1907 aa14.74□□□□□ -0.05
LIMS2-205ENST00000409455 A0A1B0GVM2 712 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 TLR4O00206 839 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 SCAMP2O15127 329 aaKnown RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 PRAMEF12O95522 483 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RHOCP08134 193 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 HBQ1P09105 142 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ACADMP11310 421 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ACRV1P26436 265 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 RRAS2P62070 204 aaPredicted RBP14.73□□□□□ -0.05
LIMS2-205ENST00000409455 NCF4Q15080 339 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 ANGPT1Q15389 498 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 WSCD2Q2TBF2 565 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 FAAH2Q6GMR7 532 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 MACC1Q6ZN28 852 aa14.73□□□□□ -0.05
LIMS2-205ENST00000409455 NPAS3Q8IXF0 933 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms