RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 THP07101 528 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 FGF2P09038 288 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 COL9A1P20849 921 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 AZGP1P25311 298 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 HSPA7P48741 367 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 DCDC1P59894 354 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PPP1R8Q12972 351 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 GTF2H3Q13889 308 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 TMEM132DQ14C87 1099 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 TSNQ15631 228 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 LTB4RQ15722 352 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 LGALSLQ3ZCW2 172 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PLA1AQ53H76 456 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 IGSF11Q5DX21 431 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 C3orf38Q5JPI3 329 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PABPC1L2AQ5JQF8 200 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 TMEM201Q5SNT2 666 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 SYPL2Q5VXT5 272 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 RGS7BPQ6MZT1 257 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 LRFN4Q6PJG9 635 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PRSS55Q6UWB4 352 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 CD300LGQ6UXG3 332 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 USP45Q70EL2 814 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 TMEM132CQ8N3T6 1108 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 NPWQ8N729 165 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 LRRC52Q8N7C0 313 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PROKR2Q8NFJ6 384 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC9A6Q92581 669 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 NXPE2Q96DL1 559 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 OR5M11Q96RB7 305 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 UBL7Q96S82 380 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 NPAS1Q99742 590 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 MAPKAP1Q9BPZ7 522 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC25A19Q9HC21 320 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 MRPL17Q9NRX2 175 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 NDRG3Q9UGV2 375 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 SCP2D1Q9UJQ7 156 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 NDRG2Q9UN36 371 aaKnown RBP10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 PADI2Q9Y2J8 665 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 CCL27Q9Y4X3 112 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 MYLKQ15746 1914 aa10.17□□□□□ -0.78
NIF3L1-204ENST00000409357 MEIKINA0A087WXM9 373 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 LOC285095A0A1B0GVY8 99 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC22A23A1A5C7 686 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 ARRDC5A6NEK1 342 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 OR6C65A6NJZ3 312 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 PLOD3O60568 738 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 TPST2O60704 377 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 PRAMEF1O95521 474 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 MPC2O95563 127 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 URODP06132 367 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 PEPDP12955 493 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 PRKAR1BP31321 381 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 EVX1P49640 407 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 EPHA5P54756 1037 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 SSTP61278 116 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 CAMK2DQ13557 499 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 GTDC1Q4AE62 458 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 ZNF730Q6ZMV8 503 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 Q8N402 240 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 NKAPQ8N5F7 415 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 MS4A15Q8N5U1 240 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 TMEM145Q8NBT3 493 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 B3GNT7Q8NFL0 401 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 OR52K2Q8NGK3 314 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 OR2T4Q8NH00 348 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 CLEC4CQ8WTT0 213 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 C7orf34Q96L11 122 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 AARSD1Q9BTE6 412 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 ABCG4Q9H172 646 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 GALNT9Q9HCQ5 603 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 SNTG1Q9NSN8 517 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 HPF1Q9NWY4 346 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 SIRT5Q9NXA8 310 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 COQ3Q9NZJ6 369 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 NLKQ9UBE8 527 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 NDOR1Q9UHB4 597 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 FAM50BQ9Y247 325 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 CFAP20Q9Y6A4 193 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 DOCK8Q8NF50 2099 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 ZNF638Q14966 1978 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-204ENST00000409357 A0A1B0GTL3 188 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 M0QYT0 321 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SLC28A1O00337 649 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ADAMDEC1O15204 470 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 ADAM12O43184 909 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SIGLEC6O43699 453 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MMP20O60882 483 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 IFNA4P05014 189 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 CLEC2LP0C7M8 214 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 FGF9P31371 208 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 KDELR2P33947 212 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 MMP12P39900 470 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 HK3P52790 923 aa10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 SNRPGP62308 76 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-204ENST00000409357 PCBP2Q15366 365 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms