RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 SH2B3Q9UQQ2 575 aa10.28□□□□□ -0.76
PBRM1-205ENST00000409057 INSL6Q9Y581 213 aa10.28□□□□□ -0.76
PBRM1-205ENST00000409057 PHRF1Q9P1Y6 1649 aaKnown RBP10.28□□□□□ -0.76
PBRM1-205ENST00000409057 NUP188Q5SRE5 1749 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 RHPN2P1A8MT19 583 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 GALTP07902 379 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 RETP07949 1114 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 CCKBRP32239 447 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 VAMP2P63027 116 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 SNTB2Q13425 540 aaKnown RBP10.27□□□□□ -0.76
PBRM1-205ENST00000409057 HMBOX1Q6NT76 420 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 HAGHLQ6PII5 290 aaPredicted RBP10.27□□□□□ -0.76
PBRM1-205ENST00000409057 BAIAP2L2Q6UXY1 529 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 DPY19L3Q6ZPD9 716 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 DENND6BQ8NEG7 585 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 COQ8AQ8NI60 647 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 SORT1Q99523 831 aa10.27□□□□□ -0.76
PBRM1-205ENST00000409057 PCDH17O14917 1159 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 RBBP9O75884 186 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 OXSR1O95747 527 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 FGF4P08620 206 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 RPL10P27635 214 aaKnown RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 HOXA11P31270 313 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 FNTBP49356 437 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 BLKP51451 505 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 RAB8AP61006 207 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 MLLT1Q03111 559 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 PROX2Q3B8N5 592 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 MSANTD1Q6ZTZ1 278 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GALNT7Q86SF2 657 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 LHFPL3Q86UP9 236 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 UBQLNLQ8IYU4 475 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 TMEM151AQ8N4L1 468 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 C7orf57Q8NEG2 295 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 SYT11Q9BT88 431 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 TAS2R3Q9NYW6 316 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 TMEM181Q9P2C4 612 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 EDDM13A0A1B0GTR0 161 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 KMOO15229 486 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 SOD2P04179 222 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 MPC1LP0DKB6 136 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 JUPP14923 745 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 DCTP40126 519 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ARSDP51689 593 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 HK3P52790 923 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ACTC1P68032 377 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ACTA1P68133 377 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GTF2IRD2BQ6EKJ0 949 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF767PQ75MW2 155 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GTF2IRD2Q86UP8 949 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 OR2L8Q8NGY9 312 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GPR83Q9NYM4 423 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 NDRG2Q9UN36 371 aaKnown RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GON4LQ3T8J9 2241 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF878C9JN71 531 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 H2AFB2P0C5Z0 115 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GM2AP17900 193 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 HTR2BP41595 481 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 RCAN2Q14206 197 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 SUSD1Q6UWL2 747 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 CEACAM19Q7Z692 300 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 UBE2Q1Q7Z7E8 422 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 IGFN1Q86VF2 1251 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 CELF5Q8N6W0 485 aaKnown RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 GDPD1Q8N9F7 314 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 PAPD5Q8NDF8 572 aaKnown RBP10.27□□□□□ -0.77
PBRM1-205ENST00000409057 LRR1Q96L50 414 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 HIST1H2AAQ96QV6 131 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 PCTPQ9UKL6 214 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 PLEKHA6Q9Y2H5 1048 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 PCDHB14Q9Y5E9 798 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 CEPT1Q9Y6K0 416 aa10.27□□□□□ -0.77
PBRM1-205ENST00000409057 ONECUT3O60422 494 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-205ENST00000409057 C8orf89P0DMQ9 161 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 C1GALT1C1LP0DN25 315 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 GATMP50440 423 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 NTRK2Q16620 822 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 LRRN1Q6UXK5 716 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF783Q6ZMS7 281 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 MFSD2AQ8NA29 543 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 SCAMP4Q969E2 229 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 NELL2Q99435 816 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF350Q9GZX5 532 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF700Q9H0M5 742 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 ZNF208O43345 1280 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 LDB2O43679 373 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
PBRM1-205ENST00000409057 S100A10P60903 97 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 GRSF1Q12849 480 aaKnown RBP eCLIP10.26□□□□□ -0.77
PBRM1-205ENST00000409057 CDK5R2Q13319 367 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 NFE2L1Q14494 772 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 MAPK14Q16539 360 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 MAMDC4Q6UXC1 1216 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 GDPGP1Q6ZNW5 385 aa10.26□□□□□ -0.77
PBRM1-205ENST00000409057 DCDC5Q6ZRR9 648 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms