RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TM9SF2Q99805 663 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC26A1Q9H2B4 701 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF552Q9H707 407 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TRMT6Q9UJA5 497 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PDE10AQ9Y233 779 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PSAT1Q9Y617 370 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TEX264Q9Y6I9 313 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ACOX3O15254 700 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SRPX2O60687 465 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ADAM11O75078 769 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 GNLYP22749 145 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MMP11P24347 488 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CHN2P52757 468 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 AP2S1P53680 142 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 RRADP55042 308 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MAGOHP61326 146 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MAT1AQ00266 395 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 Q0VFX4 171 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MED21Q13503 144 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF460Q14592 562 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ARHGAP19Q14CB8 494 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TOMM20Q15388 145 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 TMEM207Q6UWW9 146 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 AMER3Q8N944 861 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 CLEC1AQ8NC01 280 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 FBXO15Q8NCQ5 510 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC9A6Q92581 669 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 COL26A1Q96A83 441 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 KRT12Q99456 494 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 PITHD1Q9GZP4 211 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ATG10Q9H0Y0 220 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 STMN4Q9H169 189 aaPredicted RBP9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 WDR54Q9H977 334 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SIAEQ9HAT2 523 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 NUP50Q9UKX7 468 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 SNX24Q9Y343 169 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF451Q9Y4E5 1061 aa9.16□□□□□ -0.94
NIF3L1-202ENST00000409020 ITPR2Q14571 2701 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 SHANK1Q9Y566 2161 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 TACC2O95359 2948 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 A0A0A6YYC8 382 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 FEZF1A0PJY2 475 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 I3L1I5 382 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 K7EPI3 171 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PEX12O00623 359 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 FOXS1O43638 330 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ZBTB14O43829 449 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ALBP02768 609 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 RPS17P08708 135 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ZGLP1P0C6A0 271 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 GSTM2P28161 218 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 HSD17B3P37058 310 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC9A3P48764 834 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 CDK9P50750 372 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 GPR85P60893 370 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 IFITM2Q01629 132 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF33BQ06732 778 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 MORF4L2Q15014 288 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 FAM214AQ32MH5 1076 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PLEKHN1Q494U1 663 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 HECTD2Q5U5R9 776 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 YOD1Q5VVQ6 348 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 STEAP4Q687X5 459 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 VN1R4Q7Z5H5 301 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 OR11G2Q8NGC1 345 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ADAMTS16Q8TE57 1224 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 STMN2Q93045 179 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ALKBH8Q96BT7 664 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PYCR2Q96C36 320 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PGM2Q96G03 612 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 C7orf26Q96N11 449 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 GON7Q9BXV9 100 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 S100A14Q9HCY8 104 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 PAQR5Q9NXK6 330 aaPredicted RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 KLHL14Q9P2G3 628 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ANKMY1Q9P2S6 941 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 MAP4K5Q9Y4K4 846 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 SPTBN1Q01082 2364 aaKnown RBP9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 ANKRD12Q6UB98 2062 aa9.15□□□□□ -0.94
NIF3L1-202ENST00000409020 HEATR5BQ9P2D3 2071 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 WDR91A4D1P6 747 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CLEC18AA5D8T8 446 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 OR2W5A6NFC9 320 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 SMIM23A6NLE4 172 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 ZNF701M0R085 212 aaPredicted RBP9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 OR6B1O95007 311 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 TTC4O95801 387 aa9.14□□□□□ -0.95
NIF3L1-202ENST00000409020 CLPTM1O96005 669 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms