RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FAM227AF5H4B4 570 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 CPNE3O75131 537 aaKnown RBP19.3■□□□□ 0.68
CHKB-201ENST00000406938 HBQ1P09105 142 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 EFNA1P20827 205 aaPredicted RBP19.3■□□□□ 0.68
CHKB-201ENST00000406938 FBLP22087 321 aaKnown RBP19.3■□□□□ 0.68
CHKB-201ENST00000406938 HNRNPFP52597 415 aaKnown RBP19.3■□□□□ 0.68
CHKB-201ENST00000406938 MAPK10P53779 464 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 RAB15P59190 212 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 EIF3IQ13347 325 aaKnown RBP19.3■□□□□ 0.68
CHKB-201ENST00000406938 MAPKAPK3Q16644 382 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 OR52E8Q6IFG1 317 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 MSANTD1Q6ZTZ1 278 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 TMEM52Q8NDY8 209 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 OR51Q1Q8NH59 317 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 ADAMTS18Q8TE60 1221 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 COL26A1Q96A83 441 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 KLHL29Q96CT2 875 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 TAS2R7Q9NYW3 318 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 CES1P1Q9UKY3 287 aa19.3■□□□□ 0.68
CHKB-201ENST00000406938 B2RBV5 119 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 PLD2O14939 933 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 HNRNPCL1O60812 293 aaKnown RBP19.29■□□□□ 0.68
CHKB-201ENST00000406938 SCN2BO60939 215 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 ATP5HO75947 161 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 ZNF28P17035 718 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 DDX5P17844 614 aaKnown RBP19.29■□□□□ 0.68
CHKB-201ENST00000406938 XCR1P46094 333 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 MXRA7P84157 204 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 PLIN5Q00G26 463 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 ARHGAP40Q5TG30 622 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 CEACAM20Q6UY09 585 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 RINLQ6ZS11 566 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 DNAJB14Q8TBM8 379 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 SLC7A6OSQ96CW6 309 aaPredicted RBP19.29■□□□□ 0.68
CHKB-201ENST00000406938 RMND5AQ9H871 391 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 EFCAB1Q9HAE3 211 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 PRDM9Q9NQV7 894 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 MAP10Q9P2G4 905 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 MAP4K5Q9Y4K4 846 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 B3GALT1Q9Y5Z6 326 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 PDPK1O15530 556 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 ERAL1O75616 437 aaKnown RBP19.29■□□□□ 0.68
CHKB-201ENST00000406938 KCNK5O95279 499 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 NCALDP61601 193 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 TARDBPQ13148 414 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHKB-201ENST00000406938 C3orf38Q5JPI3 329 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 DCAF12Q5T6F0 453 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 TMPRSS12Q86WS5 348 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 CLECL1Q8IZS7 167 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 PCYOX1LQ8NBM8 494 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 RBM15BQ8NDT2 890 aaKnown RBP19.29■□□□□ 0.68
CHKB-201ENST00000406938 GTF2H4Q92759 462 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 ULBP3Q9BZM4 244 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 SLAMF7Q9NQ25 335 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 SERHLQ9NQF3 203 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 SLC35C2Q9NQQ7 365 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 TRPC4Q9UBN4 977 aa19.29■□□□□ 0.68
CHKB-201ENST00000406938 KIF26BQ2KJY2 2108 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 RNASET2O00584 256 aaKnown RBP19.28■□□□□ 0.68
CHKB-201ENST00000406938 CDC123O75794 336 aaPredicted RBP19.28■□□□□ 0.68
CHKB-201ENST00000406938 RORAP35398 523 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 ABHD18Q0P651 414 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 NFYCQ13952 458 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 C6orf10Q5SRN2 563 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 ANXA8L1Q5VT79 327 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 ZNF385CQ66K41 422 aaPredicted RBP19.28■□□□□ 0.68
CHKB-201ENST00000406938 DNAJC14Q6Y2X3 702 aaPredicted RBP19.28■□□□□ 0.68
CHKB-201ENST00000406938 DPP10Q8N608 796 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 VPS37AQ8NEZ2 397 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 WDR36Q8NI36 951 aaKnown RBP19.28■□□□□ 0.68
CHKB-201ENST00000406938 TBC1D20Q96BZ9 403 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 MIEF2Q96C03 454 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 DDA1Q9BW61 102 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 YIPF2Q9BWQ6 316 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■■□□ 16
CHKB-201ENST00000406938 SATB2Q9UPW6 733 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 CEP250Q9BV73 2442 aa19.28■□□□□ 0.68
CHKB-201ENST00000406938 PRSS51A0A1B0GVH4 220 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 A0A1W2PS29 197 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 FAM149AA5PLN7 773 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 SLC25A3Q00325 362 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 ART3Q13508 389 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 RSPO4Q2I0M5 234 aaPredicted RBP19.27■□□□□ 0.68
CHKB-201ENST00000406938 NKAIN1Q4KMZ8 207 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 COX15Q7KZN9 410 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 CACTIN-AS1Q8N1I8 211 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 CNRIP1Q96F85 164 aaPredicted RBP19.27■□□□□ 0.68
CHKB-201ENST00000406938 ITCHQ96J02 903 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 TAAR9Q96RI9 348 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 INPP5KQ9BT40 448 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 IL1RL2Q9HB29 575 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 SLC22A11Q9NSA0 550 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 TAS2R1Q9NYW7 299 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 SLAMF8Q9P0V8 285 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 PSME2Q9UL46 239 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 ENTPD4Q9Y227 616 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 MRPS33Q9Y291 106 aaKnown RBP19.27■□□□□ 0.68
CHKB-201ENST00000406938 MAN2B2Q9Y2E5 1009 aa19.27■□□□□ 0.68
CHKB-201ENST00000406938 PTPRZ1P23471 2315 aaPredicted RBP19.27■□□□□ 0.67
CHKB-201ENST00000406938 FXYD1O00168 92 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms