RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 HORMAD2Q8N7B1 307 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 OR10G6Q8NH81 332 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 BARD1Q99728 777 aaKnown RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 LMAN1LQ9HAT1 526 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 PDP1Q9P0J1 537 aaPredicted RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 FBXW2Q9UKT8 454 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 ATG4BQ9Y4P1 393 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 SPTBN5Q9NRC6 3674 aaKnown RBP23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 FANCMQ8IYD8 2048 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 A0A1W2PR48 441 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 GSAPA4D1B5 854 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 GLOD5A6NK44 160 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 UGT2B7P16662 529 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 CD6P30203 668 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 RPS26P62854 115 aaKnown RBP23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 LRIT3Q3SXY7 679 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 TSTD1Q8NFU3 115 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 PSMA8Q8TAA3 256 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 FLVCR1-AS1Q8TAF5 88 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 AMDHD1Q96NU7 426 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 TCEAL2Q9H3H9 227 aaPredicted RBP23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 GLIPR2Q9H4G4 154 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 SYNPO2LQ9H987 977 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 A4GALTQ9NPC4 353 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 ACTR10Q9NZ32 417 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 RAB23Q9ULC3 237 aa23.38■■□□□ 1.33
DNMT3A-206ENST00000406659 LOC100130705A0A1B0GUX0 176 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 TRIM64A6NGJ6 449 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 CHURC1-FNTBB4DL54 471 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 THEGLP0DJG4 465 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 CERS1P27544 350 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 NUDT1P36639 197 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 PIGAP37287 484 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 PCBP3P57721 371 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 EIF2B5Q13144 721 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ASPGQ86U10 573 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 EPYCQ99645 322 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ZSCAN32Q9NX65 697 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 THEGQ9P2T0 379 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 CPNE7Q9UBL6 633 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 CA14Q9ULX7 337 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 PCDHGB3Q9Y5G1 929 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 MDC1Q14676 2089 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 LRP4O75096 1905 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 GOLGA4Q13439 2230 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 OR2A25A4D2G3 310 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 CCDC160A6NGH7 325 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 TNFSF14O43557 240 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 PRKRAO75569 313 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ERAL1O75616 437 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 C9P02748 559 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ALDH3B2P48448 385 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 DAPP51397 102 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 NCBP2P52298 156 aaKnown RBP eCLIP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 BTN3A2P78410 334 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 TP53BP2Q13625 1128 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ZNF542PQ5EBM4 170 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 VN1R4Q7Z5H5 301 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 TAF8Q7Z7C8 310 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 GALNT5Q7Z7M9 940 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 FRMD1Q8N878 549 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 NT5CQ8TCD5 201 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 PATE1Q8WXA2 126 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 GAL3ST3Q96A11 431 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 ZNF347Q96SE7 839 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 LYARQ9NX58 379 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 THUMPD1Q9NXG2 353 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 KIF17Q9P2E2 1029 aa23.37■■□□□ 1.33
DNMT3A-206ENST00000406659 SPTY2D1-AS1A0A0U1RR47 76 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 TRIM64CA6NLI5 447 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 WASHC1A8K0Z3 465 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 PGRMC2O15173 223 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 MITFO75030 526 aaPredicted RBP23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 AIFM1O95831 613 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 ITGAMP11215 1152 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 CTSEP14091 401 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 TNFRSF1BP20333 461 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 MAGP20916 626 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 IL1RL1Q01638 556 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 KDM4DQ6B0I6 523 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 FBXO42Q6P3S6 717 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 FIGLAQ6QHK4 219 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 CYP4Z1Q86W10 505 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 PIK3C3Q8NEB9 887 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 FCRL4Q96PJ5 515 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 LTB4R2Q9NPC1 389 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 POT1Q9NUX5 634 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 C2orf42Q9NWW7 574 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 NDUFAF4Q9P032 175 aa23.36■■□□□ 1.33
DNMT3A-206ENST00000406659 OR5K4A6NMS3 321 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 SLC16A6O15403 523 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 B4GALT2O60909 372 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 ITGA2P17301 1181 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 CDH2P19022 906 aaPredicted RBP23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 ELK4P28324 431 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 RRM2P31350 389 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 FZD2Q14332 565 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 SZRD1Q7Z422 152 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 ARMC8Q8IUR7 673 aa23.35■■□□□ 1.33
DNMT3A-206ENST00000406659 KCT2Q8NC54 265 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms