RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 TMCC3Q9ULS5 477 aa13.94□□□□□ -0.18
NUCB1-201ENST00000405315 RBMX2Q9Y388 322 aaKnown RBP13.94□□□□□ -0.18
NUCB1-201ENST00000405315 KMOO15229 486 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GPX5O75715 221 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ADAP00813 363 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GSTT2P0CG29 244 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GSTT2BP0CG30 244 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 PIPP12273 146 aaPredicted RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ETV6P41212 452 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 CCBE1Q6UXH8 406 aaPredicted RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 CCDC190Q86UF4 302 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GPR65Q8IYL9 337 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GPR32P1Q8NGA4 272 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SLC38A5Q8WUX1 472 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 TMEM19Q96HH6 336 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 LRIG1Q96JA1 1093 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ACAT2Q9BWD1 397 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 UCK2Q9BZX2 261 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 EXOSC4Q9NPD3 245 aaKnown RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SLAMF7Q9NQ25 335 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ICKQ9UPZ9 632 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ABHD14A-ACY1A0A1B0GW23 586 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 A8MU76 341 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 PSMD11O00231 422 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SPINT1O43278 529 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SH3BP5O60239 455 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 MOSPD3O75425 235 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ALDH9A1P49189 494 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 KRR1Q13601 381 aaKnown RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 NFE2L1Q14494 772 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SEC23BQ15437 767 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ZNF77Q15935 545 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SAXO2Q658L1 398 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 GDPD3Q7L5L3 318 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 EFHD2Q96C19 240 aaPredicted RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 NUS1Q96E22 293 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 TRNT1Q96Q11 434 aaKnown RBP13.93□□□□□ -0.18
NUCB1-201ENST00000405315 SLC25A19Q9HC21 320 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 TBC1D14Q9P2M4 693 aa13.93□□□□□ -0.18
NUCB1-201ENST00000405315 ANKDD1BA6NHY2 528 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PDZK1P1A8MUH7 402 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 RTCAO00442 366 aaKnown RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PLPP1O14494 284 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CTDSP2O14595 271 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CKMT1AP12532 417 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 OSMP13725 252 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 SOX3P41225 446 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CASP3P42574 277 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 GPR1P46091 355 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PCYT1AP49585 367 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 DGKGP49619 791 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CACTIN-AS1Q8N1I8 211 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 VANGL1Q8TAA9 524 aaPredicted RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PIK3R3Q92569 461 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 RAB8BQ92930 207 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 NEURL3Q96EH8 262 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CNPPD1Q9BV87 410 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 SMURF1Q9HCE7 757 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 HHATLQ9HCP6 504 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 A4GALTQ9NPC4 353 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 REV1Q9UBZ9 1251 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PDPK1O15530 556 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 PI15O43692 258 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 OR10H3O60404 316 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 DDCP20711 480 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■□□□□ 10.6
NUCB1-201ENST00000405315 ELAVL4P26378 380 aaKnown RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 MAPK12P53778 367 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 HSPB3Q12988 150 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 DEF8Q6ZN54 512 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 ZNF547Q8IVP9 402 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 ADGRF3Q8IZF5 1079 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 KRT78Q8N1N4 520 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 HCAR2Q8TDS4 363 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 SDHCQ99643 169 aaPredicted RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 SLC30A2Q9BRI3 323 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CFHR5Q9BXR6 569 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 ABCG4Q9H172 646 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 C14orf119Q9NWQ9 140 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
NUCB1-201ENST00000405315 ASF1AQ9Y294 204 aa13.92□□□□□ -0.18
NUCB1-201ENST00000405315 H3BN98 237 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 SSX4O60224 188 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 POP7O75817 140 aaKnown RBP13.91□□□□□ -0.18
NUCB1-201ENST00000405315 SNX4O95219 450 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 APOA1P02647 267 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 SCG5P05408 212 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 CSTF2P33240 577 aaKnown RBP eCLIP13.91□□□□□ -0.18
NUCB1-201ENST00000405315 OPRD1P41143 372 aa13.91□□□□□ -0.18
NUCB1-201ENST00000405315 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
NUCB1-201ENST00000405315 SNRPGP62308 76 aaKnown RBP13.91□□□□□ -0.18
NUCB1-201ENST00000405315 SPDYE7PQ495Y7 208 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms