RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ACSL6Q9UKU0 697 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DAPP1Q9UN19 280 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MAU2Q9Y6X3 613 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DMXL1Q9Y485 3027 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ZNF292O60281 2723 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 C1orf226A1L170 272 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 EVPLLA8MZ36 301 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FAM227AF5H4B4 570 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CLIC1O00299 241 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MGRN1O60291 552 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 GALR3O60755 368 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 KRT36O76013 467 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MED26O95402 600 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 LDOC1O95751 146 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SMIM10L1P0DMW3 83 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PNLIPP16233 465 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 NELFEP18615 380 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 TRPC1P48995 793 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DUSP3P51452 185 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SESN3P58005 492 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ACTR3P61158 418 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SLC14A1Q13336 389 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 GAB1Q13480 694 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 NDUFA9Q16795 377 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CYP51A1Q16850 503 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SYT16Q17RD7 645 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PROX2Q3B8N5 592 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 RUNDC3AQ59EK9 446 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 TCTE1Q5JU00 501 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PLA2G2CQ5R387 149 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MANEAQ5SRI9 462 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MRM1Q6IN84 353 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 MSANTD1Q6ZTZ1 278 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CAMKMTQ7Z624 323 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DHFR2Q86XF0 187 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CCDC116Q8IYX3 515 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 TRIML2Q8N7C3 387 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 OR8J3Q8NGG0 315 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 PYDC1Q8WXC3 89 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ASB9Q96DX5 294 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FAM120BQ96EK7 910 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 ZBED6CLQ96FA7 236 aaPredicted RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SMIM10Q96HG1 83 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 LRGUKQ96M69 825 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CCDC115Q96NT0 180 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 GFM1Q96RP9 751 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 SH3GL1Q99961 368 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SLC35A5Q9BS91 424 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SLC7A5P2Q9GIP4 190 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 RPF2Q9H7B2 306 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 TPT1P8Q9HAU6 139 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 FGF21Q9NSA1 209 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 LYARQ9NX58 379 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 TAS2R9Q9NYW1 312 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 DHCR7Q9UBM7 475 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 FTSJ1Q9UET6 329 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 CD300AQ9UGN4 299 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 VPS4AQ9UN37 437 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ENTPD4Q9Y227 616 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 WBP11Q9Y2W2 641 aaKnown RBP3.51□□□□□ -1.85
RTN4-208ENST00000404909 MAP4K5Q9Y4K4 846 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SLC22A7Q9Y694 548 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 SPACA6W5XKT8 324 aa3.51□□□□□ -1.85
RTN4-208ENST00000404909 MN1Q10571 1320 aaPredicted RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 IGHV5-10-1A0A0J9YXX1 117 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 OR2W5A6NFC9 320 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 GSTA4O15217 222 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 LDB3O75112 727 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 ATP6V1G2O95670 118 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 BAG2O95816 211 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 CKMT2P17540 419 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 DDX5P17844 614 aaKnown RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 PTPN6P29350 595 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 NTSP30990 170 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 CRATP43155 626 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 GSTM5P46439 218 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 OR1D4P47884 311 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 ARFIP1P53367 373 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 PRKAG1P54619 331 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 OR4D2P58180 307 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 MRPS22P82650 360 aaKnown RBP3.5□□□□□ -1.85
RTN4-208ENST00000404909 TNFRSF17Q02223 184 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 CCNIQ14094 377 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 ERV3-1Q14264 604 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 GRM7Q14831 915 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 PRTGQ2VWP7 1150 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 INAVAQ3KP66 663 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.5□□□□□ -1.85
RTN4-208ENST00000404909 LRIF1Q5T3J3 769 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 C1orf189Q5VU69 101 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 SLC48A1Q6P1K1 146 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 SPPL2CQ8IUH8 684 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 C10orf111Q8N326 155 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 D2HGDHQ8N465 521 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 ADCY4Q8NFM4 1077 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 OR2T12Q8NG77 320 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 OR1L3Q8NH93 324 aa3.5□□□□□ -1.85
RTN4-208ENST00000404909 DNAJB8Q8NHS0 232 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms