RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 NEDD8-MDP1E9PL57 170 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 DAPP51397 102 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 XKP51811 444 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 TCTE1Q5JU00 501 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 DCST1Q5T197 706 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 UNC93AQ86WB7 457 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 NPWQ8N729 165 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 CD300LFQ8TDQ1 290 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 MBOAT4Q96T53 435 aa13.2□□□□□ -0.3
RUNX3-203ENST00000399916 SCN9AQ15858 1988 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 A0A1B0GV50 99 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 TRBC1P01850 177 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 MT-ND4P03905 459 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 DSC2Q02487 901 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 CRHR2Q13324 411 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 USP51Q70EK9 711 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 OR10K1Q8NGX5 313 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 RAET1EQ8TD07 263 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 KLRG1Q96E93 195 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 OR4K3Q96R72 315 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 UHRF1Q96T88 793 aaPredicted RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 THAP7Q9BT49 309 aaPredicted RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 IFNW1P05000 195 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 RETSATQ6NUM9 610 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 ADCK2Q7Z695 626 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 MS4A15Q8N5U1 240 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 TEPSINQ96N21 525 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 H3BRB1 525 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 GFRA2O00451 464 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 HCN1O60741 890 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 ITPKAP23677 461 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 HTR2AP28223 471 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 DNAJB13P59910 316 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 ZXDBP98169 803 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 NLGN4YQ8NFZ3 816 aaPredicted RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 OR5AK3PQ8NH89 298 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 FNDC11Q9BVV2 318 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 DZANK1Q9NVP4 752 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
RUNX3-203ENST00000399916 PCDHA9Q9Y5H5 950 aa13.19□□□□□ -0.3
RUNX3-203ENST00000399916 SHOXO15266 292 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 LGALS2P05162 132 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 ATP4BP51164 291 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 VMACQ2NL98 169 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 SHEQ5VZ18 495 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 PLPPR4Q7Z2D5 763 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 MAL2Q969L2 176 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 DPYSL5Q9BPU6 564 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 NKX6-2Q9C056 277 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 DNTTIP1Q9H147 329 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 GSTO2Q9H4Y5 243 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 DIMT1Q9UNQ2 313 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 A0A0G2JMP0 313 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 F9P00740 461 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 ESR1P03372 595 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 CSF3P09919 207 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 UGT2B7P16662 529 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 KDELR2P33947 212 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 CD68P34810 354 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 SLC11A2P49281 568 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 CCR6P51684 374 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 SNRPEP62304 92 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 RBM39Q14498 530 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 COL19A1Q14993 1142 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 SHQ1Q6PI26 577 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 OR4F6Q8NGB9 312 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 YIPF6Q96EC8 236 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 CMSS1Q9BQ75 279 aaKnown RBP13.18□□□□□ -0.3
RUNX3-203ENST00000399916 IFT27Q9BW83 186 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 PINK1Q9BXM7 581 aa13.18□□□□□ -0.3
RUNX3-203ENST00000399916 UNKLQ9H9P5 680 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms