RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 C6orf120Q7Z4R8 191 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 CYP4Z1Q86W10 505 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 NRROSQ86YC3 692 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 TRIM48Q8IWZ4 208 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 OR8K5Q8NH50 307 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 MACROD1Q9BQ69 325 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 TTYH1Q9H313 450 aaPredicted RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 C6orf106Q9H6K1 298 aaPredicted RBP24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 SLC35C2Q9NQQ7 365 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 THSD1Q9NS62 852 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 KLHL20Q9Y2M5 609 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 ASB4Q9Y574 426 aa24.44■■□□□ 1.5
SHARPIN-202ENST00000398712 FANCMQ8IYD8 2048 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 BCKDKO14874 412 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 JRKO75564 520 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 CDK9P50750 372 aaKnown RBP24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 ZNF691Q5VV52 312 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 ARMC8Q8IUR7 673 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 HORMAD2Q8N7B1 307 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 ZFPM2Q8WW38 1151 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 GEMIN6Q8WXD5 167 aaKnown RBP24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 NDUFAF4Q9P032 175 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 PCDHGA8Q9Y5G5 932 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 CEPT1Q9Y6K0 416 aa24.43■■□□□ 1.5
SHARPIN-202ENST00000398712 TRBV23OR9-2A0A075B6M9 112 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 A0A1W2PPC1 479 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 C4orf51C9J302 202 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 MAN2B1O00754 1011 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 IGHV4-34P06331 123 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 RRM2P31350 389 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 CCT3P49368 545 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 LAPTM4AQ15012 233 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 SETD9Q8NE22 299 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 OR13H1Q8NG92 308 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 BBS4Q96RK4 519 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 PHF7Q9BWX1 381 aaPredicted RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 SLC2A4RGQ9NR83 387 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 XIRP2A4UGR9 3374 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 MDC1Q14676 2089 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 SRFP11831 508 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 RYKP34925 604 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 GPC1P35052 558 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 RGS1Q08116 209 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 TOP3AQ13472 1001 aaPredicted RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 TNFAIP8L2Q6P589 184 aaPredicted RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 GPR141Q7Z602 305 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 GALNT5Q7Z7M9 940 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 ATG16L2Q8NAA4 619 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 NMD3Q96D46 503 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 AMDHD1Q96NU7 426 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 TWSG1Q9GZX9 223 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 GLIPR2Q9H4G4 154 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 PAPOLBQ9NRJ5 636 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 LYARQ9NX58 379 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 APOBEC3BQ9UH17 382 aaKnown RBP24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 BLOC1S6Q9UL45 172 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 RAB23Q9ULC3 237 aa24.42■■□□□ 1.5
SHARPIN-202ENST00000398712 MITFO75030 526 aaPredicted RBP24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 LRIT3Q3SXY7 679 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 FAHD1Q6P587 224 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 GPBAR1Q8TDU6 330 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 UCN3Q969E3 161 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 GAL3ST3Q96A11 431 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 ZNF300Q96RE9 604 aaPredicted RBP24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 GSDMCQ9BYG8 508 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 ADNPQ9H2P0 1102 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 RIBC2Q9H4K1 309 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 KRT84Q9NSB2 600 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 PTTG2Q9NZH5 202 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 CYP8B1Q9UNU6 501 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 SNX11Q9Y5W9 270 aa24.41■■□□□ 1.5
SHARPIN-202ENST00000398712 H3BSA7 217 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 ETS2P15036 469 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 NCBP2P52298 156 aaKnown RBP eCLIP24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 RPS26P62854 115 aaKnown RBP24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 IL1RL1Q01638 556 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 KEAP1Q14145 624 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 C6orf141Q5SZD1 244 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 ZNF773Q6PK81 442 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 B3GNT6Q6ZMB0 384 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 Q6ZS52 159 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 TSEN54Q7Z6J9 526 aaKnown RBP24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 ASPGQ86U10 573 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 CHDHQ8NE62 594 aaPredicted RBP24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 NT5CQ8TCD5 201 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 TMIGD2Q96BF3 282 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 TOE1Q96GM8 510 aaKnown RBP24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 LTB4R2Q9NPC1 389 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 ZNF451Q9Y4E5 1061 aa24.4■■□□□ 1.5
SHARPIN-202ENST00000398712 TMEM265A0A087WTH1 108 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 A0A1W2PR48 441 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 OR2A25A4D2G3 310 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 TMEM247A6NEH6 219 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 TNFRSF11BO00300 401 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 PDE9AO76083 593 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 VIPP01282 170 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 BCHEP06276 602 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 EEF1B2P24534 225 aaKnown RBP24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 CERS1P27544 350 aa24.39■■□□□ 1.5
SHARPIN-202ENST00000398712 NUDT1P36639 197 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms