RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GAL3ST4Q96RP7 486 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 RSRP1Q9BUV0 290 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MND1Q9BWT6 205 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 WDR41Q9HAD4 459 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 HIF1ANQ9NWT6 349 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 CNIH4Q9P003 139 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MIOXQ9UGB7 285 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 KCTD3Q9Y597 815 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 A0A087WZ62 844 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 A0A1W2PQ09 198 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 M0QZK8 103 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 USP12O75317 370 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TUSC2O75896 110 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 GSRP00390 522 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MT-ATP6P00846 226 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ABCD3P28288 659 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ADORA2BP29275 332 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 SHMT2P34897 504 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 RPL6Q02878 288 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TTLL4Q14679 1199 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 AP5B1Q2VPB7 878 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 DCAF4L1Q3SXM0 396 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 COQ5Q5HYK3 327 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 LIPMQ5VYY2 423 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 LILRA6Q6PI73 481 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM65Q6PI78 240 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MAVSQ7Z434 540 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 STK40Q8N2I9 435 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 FDXACB1Q9BRP7 624 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TCEAL7Q9BRU2 100 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 GTPBP2Q9BX10 602 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 KAT8Q9H7Z6 458 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MKLN1Q9UL63 735 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 INSL6Q9Y581 213 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 A0A1W2PRB8 838 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 EEF2KO00418 725 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MSI1O43347 362 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TGM5O43548 720 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MFSD11O43934 449 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 OR6B1O95007 311 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 C2P06681 752 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 OR2T7P0C7T2 308 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ACPPP15309 386 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 CPT2P23786 658 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 BNC1Q01954 994 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 DUSP8Q13202 625 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MPEG1Q2M385 716 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 NADK2Q4G0N4 442 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 GXYLT1Q4G148 440 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 PAN3Q58A45 887 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM182AQ5T1J6 154 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 FSTL4Q6MZW2 842 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 GALNT4Q8N4A0 578 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 BHLHE22Q8NFJ8 381 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ELMO1Q92556 727 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 FUBP1Q96AE4 644 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MRGPRX4Q96LA9 322 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 FCRL3Q96P31 734 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 TEFMQ96QE5 360 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 GATA5Q9BWX5 397 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 CACNG6Q9BXT2 260 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ACE2Q9BYF1 805 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC6A16Q9GZN6 736 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 SPATC1LQ9H0A9 340 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 OR52A5Q9H2C5 316 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 PRDM12Q9H4Q4 367 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF696Q9H7X3 374 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 NOL11Q9H8H0 719 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 PAK6Q9NQU5 681 aaPredicted RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 MED17Q9NVC6 651 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 ADA2Q9NZK5 511 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 VAPAQ9P0L0 249 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 RSL24D1Q9UHA3 163 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 KCNK7Q9Y2U2 307 aa6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
TM9SF4-202ENST00000398022 OR2AG2A6NM03 316 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 H3BNX3 289 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF195O14628 629 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GIPC1O14908 333 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 DYRK3O43781 588 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 DNAJA2O60884 412 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ERN1O75460 977 aaKnown RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 CH25HO95992 272 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ADRB1P08588 477 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 NUDT7P0C024 238 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 SAT1P21673 171 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 GRK4P32298 578 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MATKP42679 507 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PREPP48147 710 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 MGAT3Q09327 533 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF169Q14929 603 aaPredicted RBP6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF628Q5EBL2 1059 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 PPM1LQ5SGD2 360 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM26Q6ZUK4 368 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms