RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 COQ9O75208 318 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 E2F6O75461 281 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 UBTFL6P0CB48 400 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LAMP1P11279 417 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NAGAP17050 411 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LIMS1P48059 325 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NUBP1P53384 320 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NTHL1P78549 312 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 DCTN2Q13561 401 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 STK32CQ86UX6 486 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 HS6ST2Q96MM7 605 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 FN3KQ9H479 309 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 MRPS18AQ9NVS2 196 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SCN2AQ99250 2005 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LRIT2A6NDA9 550 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 C5orf58C9J3I9 102 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NDUFS4O43181 175 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LGI1O95970 557 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CD27P26842 260 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 BDH1Q02338 343 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 RHOXF1Q8NHV9 184 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 C16orf78Q8WTQ4 265 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CRELD1Q96HD1 420 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NTN4Q9HB63 628 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SRPK3Q9UPE1 567 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF682O95780 498 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SHHQ15465 462 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 IYDQ6PHW0 289 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 OGFOD3Q6PK18 319 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PARGQ86W56 976 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 EPHX4Q8IUS5 362 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SLC44A2Q8IWA5 706 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF595Q8IYB9 648 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 LCN9Q8WX39 176 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 FAM162AQ96A26 154 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ZSWIM3Q96MP5 696 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 YIPF3Q9GZM5 350 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ATG10Q9H0Y0 220 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 AURKCQ9UQB9 309 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 HSPB2A8KAH6 182 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 C2orf74A8MZ97 194 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 H0YIG0 161 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MID1O15344 667 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 GUCA1CO95843 209 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 CRHBPP24387 322 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SEC13P55735 322 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DSTNP60981 165 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 HSPB2Q16082 182 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 HDDC3Q8N4P3 179 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 APOBEC4Q8WW27 367 aaKnown RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 NAT6Q93015 286 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 VMP1Q96GC9 406 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MS4A4EQ96PG1 132 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MTERF1Q99551 399 aaKnown RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PIP5K1AQ99755 562 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 CIB1Q99828 191 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 INPP5EQ9NRR6 644 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 RAPGEFL1Q9UHV5 662 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 LRP4O75096 1905 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 A0A0A6YYD5 115 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 A0A1B0GW55 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MEI4A8MW99 385 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ATP1B1P05026 303 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L2P0CJ85 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L3P0CJ86 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L4P0CJ87 422 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L5P0CJ88 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L6P0CJ89 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4L7P0CJ90 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 GJA1P17302 382 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MAP3K8P41279 467 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 HNRNPKP61978 463 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MRPL28Q13084 256 aaKnown RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 TCEAL5Q5H9L2 206 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 RNF220Q5VTB9 566 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ZCCHC8Q6NZY4 707 aaKnown RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 FBXL6Q8N531 539 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 GIPC3Q8TF64 312 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 S100ZQ8WXG8 99 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DNASE2BQ8WZ79 361 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 ART5Q96L15 291 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 C17orf62Q9BQA9 187 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 DUX4Q9UBX2 424 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PNMA8CA0A1B0GUJ8 204 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 G3V2T6 193 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PLPP1O14494 284 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PEX14O75381 377 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 CST1P01037 141 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 RRM2P31350 389 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 GDF5P43026 501 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 KCNJ5P48544 419 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 RPE65Q16518 533 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SLITRK4Q8IW52 837 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 MRGPRX1Q96LB2 322 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SERINC2Q96SA4 455 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 SLC29A1Q99808 456 aa5.57□□□□□ -1.52
PTPRD-206ENST00000397617 PPIEQ9UNP9 301 aaKnown RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 C19orf53Q9UNZ5 99 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-206ENST00000397617 A0A1W2PPC4 97 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms