RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 C10orf90Q96M02 699 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 MAPKAP1Q9BPZ7 522 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 ECSITQ9BQ95 431 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 TRIM15Q9C019 465 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 ALG2Q9H553 416 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 RPF2Q9H7B2 306 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 IL1RL2Q9HB29 575 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 SEMA3GQ9NS98 782 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 CUTCQ9NTM9 273 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 VAPAQ9P0L0 249 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 CES1P1Q9UKY3 287 aa17.98■□□□□ 0.47
TSPAN4-204ENST00000397404 DMDP11532 3685 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 MYO1GB0I1T2 1018 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 SH3BP5O60239 455 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 CSNK2A2P19784 350 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 PTPN6P29350 595 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 CCKBRP32239 447 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 CSTF2P33240 577 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 GCGRP47871 477 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 MAPK10P53779 464 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 ELF3P78545 371 aaPredicted RBP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 ZFP36L1Q07352 338 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 FADDQ13158 208 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 C1orf146Q5VVC0 180 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 TMEM64Q6YI46 380 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 SERPINA11Q86U17 422 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 PTRH1Q86Y79 214 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 AGBL5Q8NDL9 886 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 OR4K14Q8NGD5 310 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 OR1F2PQ96R84 312 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 BBS4Q96RK4 519 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 THUMPD1Q9NXG2 353 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 TMEM9Q9P0T7 183 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 CLCA2Q9UQC9 943 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 GPR179Q6PRD1 2367 aa17.97■□□□□ 0.47
TSPAN4-204ENST00000397404 CLDN4O14493 209 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 DSCR3O14972 297 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 CBFA2T3O75081 653 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 GMNNO75496 209 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 STATHP02808 62 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 IL1RNP18510 177 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 UQCRC2P22695 453 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 HTR1EP28566 365 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ACTR3P61158 418 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ABHD18Q0P651 414 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 SPEM2Q0P670 501 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 SF3A2Q15428 464 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 FXNQ16595 210 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF385BQ569K4 471 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ERICH5Q6P6B1 374 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 PRR23CQ6ZRP0 262 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 RIPOR1Q6ZS17 1223 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ZNF621Q6ZSS3 439 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 CA13Q8N1Q1 262 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 AMER3Q8N944 861 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 CCDC74BQ96LY2 380 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 THUMPD3Q9BV44 507 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 SLAMF8Q9P0V8 285 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 RARRES3Q9UL19 164 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 ATXN7L1Q9ULK2 861 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 POMPQ9Y244 141 aa17.96■□□□□ 0.47
TSPAN4-204ENST00000397404 CROCCQ5TZA2 2017 aa17.96■□□□□ 0.46
TSPAN4-204ENST00000397404 CLIC1O00299 241 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 NME4O00746 187 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 HCRTR1O43613 425 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 FOLR1P15328 257 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 GPX2P18283 190 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 ANXA11P50995 505 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 HBA1P69905 142 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 RUNX2Q13950 521 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CEACAM7Q14002 265 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CAPRIN1Q14444 709 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 MTX3Q5HYI7 312 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 RBM44Q6ZP01 1051 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 ANKRD46Q86W74 232 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 PROSER1Q86XN7 944 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 PDSS2Q86YH6 399 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 HPS6Q86YV9 775 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 SFXN5Q8TD22 340 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 EXOSC8Q96B26 276 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 MIEF2Q96C03 454 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CPPED1Q9BRF8 314 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 PELOQ9BRX2 385 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 KAT8Q9H7Z6 458 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CMTM6Q9NX76 183 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 PCDHB3Q9Y5E6 796 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 A0A1B0GX78 115 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 PRORSD1PA6NEY8 169 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CYR61O00622 381 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 FOXS1O43638 330 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 MGRN1O60291 552 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 BCAS2O75934 225 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 SOX30O94993 753 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 CPSF4O95639 269 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 DSG2Q14126 1118 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 ANKRD26P1Q6NSI1 321 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 RHBDD2Q6NTF9 364 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 GLRX5Q86SX6 157 aa17.95■□□□□ 0.46
TSPAN4-204ENST00000397404 LRRC25Q8N386 305 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms