RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TCRBV7S3A2A0A539 114 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CTAGE15A4D2H0 777 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 A8MV72 311 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 C4orf51C9J302 202 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CCL3P10147 92 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SLC1A2P43004 574 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MAGEA6P43360 314 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 AGFG1P52594 562 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 RAB38P57729 211 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 STXBP1P61764 594 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 TIAL1Q01085 375 aaKnown RBP eCLIP8.66□□□□□ -1.022e-8■□□□□ 10.6
NEDD9-203ENST00000397378 TBL3Q12788 808 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SLC13A2Q13183 592 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 BMPR2Q13873 1038 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 RUNX2Q13950 521 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 VEZF1Q14119 521 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SIX1Q15475 284 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CASC4Q6P4E1 433 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CTAGE6Q86UF2 777 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CAND1Q86VP6 1230 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 LACC1Q8IV20 430 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MYO1HQ8N1T3 1032 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MORN4Q8NDC4 146 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SLC5A11Q8WWX8 675 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ATL1Q8WXF7 558 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF669Q96BR6 464 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 AIF1LQ9BQI0 150 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 AICDAQ9GZX7 198 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF703Q9H7S9 590 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 PELI2Q9HAT8 420 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ACKR4Q9NPB9 350 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SEMA4BQ9NPR2 832 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ARL15Q9NXU5 204 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 TAS2R13Q9NYV9 303 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 FBXO5Q9UKT4 447 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MRPS33Q9Y291 106 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CLCA3PQ9Y6N3 262 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.66□□□□□ -1.02
NEDD9-203ENST00000397378 CR1P17927 2039 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 EXPH5Q8NEV8 1989 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 MEGF8Q7Z7M0 2845 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 PABPN1LA6NDY0 278 aaKnown RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF354AO60765 605 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 HAUS5O94927 633 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 IL2RAP01589 272 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 MLNP12872 115 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 HNRNPFP52597 415 aaKnown RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF136P52737 540 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 RNF4P78317 190 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 BTN3A2P78410 334 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 CCZ1BP86790 482 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 CCZ1P86791 482 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 KIF5AQ12840 1032 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 CAPRIN1Q14444 709 aaKnown RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 MPEG1Q2M385 716 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF791Q3KP31 576 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ACSF3Q4G176 576 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 TOR1AIP1Q5JTV8 583 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 SLC22A10Q63ZE4 541 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ADGRD1Q6QNK2 874 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 PAQR3Q6TCH7 311 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 LRRC25Q8N386 305 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 TMEM52Q8NDY8 209 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 OR5L2Q8NGL0 311 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 OR14A16Q8NHC5 309 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 PTPMT1Q8WUK0 201 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ROBO4Q8WZ75 1007 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ISL2Q96A47 359 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 FAR2Q96K12 515 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 TRIM54Q9BYV2 358 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ZFP64Q9NPA5 681 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 BOKQ9UMX3 212 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ZKSCAN5Q9Y2L8 839 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 MAD1L1Q9Y6D9 718 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 CAPN6Q9Y6Q1 641 aa8.65□□□□□ -1.02
NEDD9-203ENST00000397378 ROS1P08922 2347 aa8.65□□□□□ -1.03
NEDD9-203ENST00000397378 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 ABCA1O95477 2261 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
NEDD9-203ENST00000397378 A0A088AWK7 358 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 SDR42E2A6NKP2 422 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 CYR61O00622 381 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 NRDCO43847 1150 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 CTNSO60931 367 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 IFNA16P05015 189 aa8.64□□□□□ -1.03
NEDD9-203ENST00000397378 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms