RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CA13Q8N1Q1 262 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 C7orf57Q8NEG2 295 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 ATOH1Q92858 354 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-209ENST00000397036 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 SLC39A3Q9BRY0 314 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-209ENST00000397036 MUC13Q9H3R2 512 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 STARD5Q9NSY2 213 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 BCAP29Q9UHQ4 241 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 UTS2RQ9UKP6 389 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CDC14AQ9UNH5 594 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 POMPQ9Y244 141 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 SPTBP11277 2137 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 A8MU76 341 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 MGRN1O60291 552 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 ANP32DO95626 131 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 IFI6P09912 130 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 GPX2P18283 190 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CSNK2A2P19784 350 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 IL10P22301 178 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 HTR1EP28566 365 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CDKN2CP42773 168 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 MANFP55145 182 aaKnown RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 ACTR3P61158 418 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 HBA1P69905 142 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 BNIP2Q12982 314 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 SPIDRQ14159 915 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 KCNAB1Q14722 419 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 C18orf63Q68DL7 685 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 ZNF621Q6ZSS3 439 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 PRSS41Q7RTY9 318 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 PTRH1Q86Y79 214 aaKnown RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CLECL1Q8IZS7 167 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 EFCAB3Q8N7B9 438 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 ASB9Q96DX5 294 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CCDC74BQ96LY2 380 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 DPH2Q9BQC3 489 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 TRIM4Q9C037 500 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 RPF2Q9H7B2 306 aaKnown RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 KAT8Q9H7Z6 458 aaKnown RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CUTCQ9NTM9 273 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 GIMAP4Q9NUV9 329 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
MCF2L-209ENST00000397036 SRPK3Q9UPE1 567 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CORO2BQ9UQ03 480 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 PCDHGA1Q9Y5H4 931 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 MUC6Q6W4X9 2439 aa12.84□□□□□ -0.35
MCF2L-209ENST00000397036 CROCCQ5TZA2 2017 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 RALGAPA1Q6GYQ0 2036 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 EVPLLA8MZ36 301 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 TMX2-CTNND1H3BSU7 103 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 SGK494L7N484 410 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CLIC1O00299 241 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 ACOT8O14734 319 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CHST10O43529 356 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 MED26O95402 600 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CPSF4O95639 269 aaKnown RBP12.83□□□□□ -0.35
MCF2L-209ENST00000397036 C6orf47O95873 294 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 RNH1P13489 461 aaKnown RBP12.83□□□□□ -0.35
MCF2L-209ENST00000397036 UQCRC2P22695 453 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 NTSP30990 170 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CCKBRP32239 447 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 MPIP34949 423 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 VAC14Q08AM6 782 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 BIKQ13323 160 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 GPR19Q15760 415 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 RABL3Q5HYI8 236 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 PRR23CQ6ZRP0 262 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 GPR155Q7Z3F1 870 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 SERPINA11Q86U17 422 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CALHM3Q86XJ0 350 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 ZFP90Q8TF47 636 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CIDECQ96AQ7 238 aaPredicted RBP12.83□□□□□ -0.35
MCF2L-209ENST00000397036 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.35
MCF2L-209ENST00000397036 AMDHD1Q96NU7 426 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 ECSITQ9BQ95 431 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 SPATA9Q9BWV2 254 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 SLC6A13Q9NSD5 602 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 RXFP3Q9NSD7 469 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 NCDNQ9UBB6 729 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.35
MCF2L-209ENST00000397036 ZNF780BQ9Y6R6 833 aa12.83□□□□□ -0.35
MCF2L-209ENST00000397036 NUP214P35658 2090 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PROB1E7EW31 1015 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 DSCR3O14972 297 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF749O43361 778 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms