RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ALG11Q2TAA5 492 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 BROXQ5VW32 411 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 REEP3Q6NUK4 255 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 ABHD17CQ6PCB6 329 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 HORMAD2Q8N7B1 307 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 SRFBP1Q8NEF9 429 aaKnown RBP14.19□□□□□ -0.14
CBX3-202ENST00000396386 OR8K5Q8NH50 307 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 CCL4L1Q8NHW4 92 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 PSMA8Q8TAA3 256 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 FAM3CQ92520 227 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 SRMSQ9H3Y6 488 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 NDUFAF4Q9P032 175 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 USP36Q9P275 1121 aaKnown RBP14.19□□□□□ -0.14
CBX3-202ENST00000396386 KLF15Q9UIH9 416 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 F5P12259 2224 aa14.19□□□□□ -0.14
CBX3-202ENST00000396386 A6NCN8 305 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TOR1BO14657 336 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 ZW10O43264 779 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 F3P13726 295 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TNFRSF1BP20333 461 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 ATP5A1P25705 553 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 TTKP33981 857 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TSFMP43897 325 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 STXBP1P61764 594 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 ROR2Q01974 943 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 TFF2Q03403 129 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 LSAMPQ13449 338 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 MEP1AQ16819 746 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 CTU2Q2VPK5 515 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 PRRT3Q5FWE3 981 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TJAP1Q5JTD0 557 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 C6orf141Q5SZD1 244 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TNFAIP8L2Q6P589 184 aaPredicted RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 KCTD8Q6ZWB6 473 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 C6orf120Q7Z4R8 191 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 PAQR7Q86WK9 346 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 ARMC8Q8IUR7 673 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SLC22A18Q96BI1 424 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SLC35G5Q96KT7 338 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 ZNF300Q96RE9 604 aaPredicted RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 POLR1BQ9H9Y6 1135 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TRNAU1APQ9NX07 287 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 KLHL20Q9Y2M5 609 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 PCDHGA2Q9Y5H1 932 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SNX11Q9Y5W9 270 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 LYVE1Q9Y5Y7 322 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TNFRSF11BO00300 401 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 BTN3A3O00478 584 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 CPNE6O95741 557 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 BCHEP06276 602 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 CYP4B1P13584 511 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 RPS15AP62244 130 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 SPIBQ01892 262 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TGM3Q08188 693 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SLAMF1Q13291 335 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 TP53BP2Q13625 1128 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 RAPSNQ13702 412 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SKIV2LQ15477 1246 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 MRM1Q6IN84 353 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 TSEN54Q7Z6J9 526 aaKnown RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 ACOT4Q8N9L9 421 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 FBLIM1Q8WUP2 373 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 MPP4Q96JB8 637 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 MACROD1Q9BQ69 325 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 SLC35C2Q9NQQ7 365 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 PRDM7Q9NQW5 492 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 RAB23Q9ULC3 237 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 PNMA8BQ9ULN7 279 aaPredicted RBP14.18□□□□□ -0.14
CBX3-202ENST00000396386 HS3ST3A1Q9Y663 406 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 HSPE1-MOB4S4R3N1 261 aa14.18□□□□□ -0.14
CBX3-202ENST00000396386 VCANP13611 3396 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 MAN2B1O00754 1011 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 B4GAT1O43505 415 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 NARSO43776 548 aaKnown RBP14.17□□□□□ -0.14
CBX3-202ENST00000396386 ABCB7O75027 752 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 DNAJB5O75953 348 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 CERS1P27544 350 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 GPC1P35052 558 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 POLR2IP36954 125 aaKnown RBP14.17□□□□□ -0.14
CBX3-202ENST00000396386 SLC19A1P41440 591 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 RABIFP47224 123 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 CCT3P49368 545 aaKnown RBP14.17□□□□□ -0.14
CBX3-202ENST00000396386 ISL1P61371 349 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 IL5RAQ01344 420 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 ILF3Q12906 894 aaKnown RBP eCLIP14.17□□□□□ -0.141e-7■■■■□ 21.9
CBX3-202ENST00000396386 KIR2DS3Q14952 304 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 Q6ZSR6 202 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 TRIM48Q8IWZ4 208 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 TTC29Q8NA56 475 aaPredicted RBP14.17□□□□□ -0.14
CBX3-202ENST00000396386 GIPC3Q8TF64 312 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 UCN3Q969E3 161 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 AMDHD1Q96NU7 426 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 BBS4Q96RK4 519 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 APOL4Q9BPW4 351 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 GLIPR2Q9H4G4 154 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 EXD2Q9NVH0 621 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 LYARQ9NX58 379 aaKnown RBP14.17□□□□□ -0.14
CBX3-202ENST00000396386 APOBEC3BQ9UH17 382 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms