RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TRIM45Q9H8W5 580 aaPredicted RBP12.81□□□□□ -0.36
CXCL12-205ENST00000395794 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 NPIPA1Q9UND3 350 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 ERVK-11Q9UQG0 969 aa12.81□□□□□ -0.36
CXCL12-205ENST00000395794 LRRC14BA6NHZ5 514 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 C17orf105B2RV13 164 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 TRIM49D1C9J1S8 452 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 STX16-NPEPL1H3BU86 382 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 TGFBR3LH3BV60 316 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 CCL21O00585 134 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 STX16O14662 325 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 SLC19A2O60779 497 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ZG16O60844 167 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 LDB3O75112 727 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 SIX3O95343 332 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 CLDN1O95832 211 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 SNRPAP09012 282 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF24P17028 368 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 BUD31P41223 144 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 MAGEA12P43365 314 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 RPS13P62277 151 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 CUL3Q13618 768 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ZRSR2Q15696 482 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 UBAP2Q5T6F2 1119 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 TRMT10CQ7L0Y3 403 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 PLD6Q8N2A8 252 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ZCCHC7Q8N3Z6 543 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 L3MBTL4Q8NA19 623 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 ISL2Q96A47 359 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 GPR137Q96N19 417 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 FRMD6Q96NE9 622 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 DGAT2Q96PD7 388 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 TSPAN10Q9H1Z9 355 aaPredicted RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 MRPL46Q9H2W6 279 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 RPF2Q9H7B2 306 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 WDR41Q9HAD4 459 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 LYARQ9NX58 379 aaKnown RBP12.8□□□□□ -0.36
CXCL12-205ENST00000395794 PSD3Q9NYI0 1048 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 XPR1Q9UBH6 696 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 SH3BGRL2Q9UJC5 107 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 NFU1Q9UMS0 254 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 RNF11Q9Y3C5 154 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 CLDN16Q9Y5I7 305 aa12.8□□□□□ -0.36
CXCL12-205ENST00000395794 SCN2AQ99250 2005 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 CNTRLQ7Z7A1 2325 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 MYOCOSA0A1B0GUC4 107 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 A8MVJ9 347 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 FOXE1O00358 373 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-205ENST00000395794 PLPP1O14494 284 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ASNA1O43681 348 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 OR2J2O76002 312 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ESRRAP11474 423 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ECHS1P30084 290 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 GPR143P51810 404 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 PLIN5Q00G26 463 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ID2Q02363 134 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 IFT88Q13099 833 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 C10orf62Q5T681 223 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-205ENST00000395794 CNPY4Q8N129 248 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 RNF175Q8N4F7 328 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
CXCL12-205ENST00000395794 DCAKDQ8WVC6 231 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 MTBPQ96DY7 904 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ART5Q96L15 291 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 SERPINI1Q99574 410 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 SORBS1Q9BX66 1292 aaKnown RBP12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ZNF358Q9NW07 568 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 HPF1Q9NWY4 346 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 MYOTQ9UBF9 498 aa12.79□□□□□ -0.36
CXCL12-205ENST00000395794 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 WWP2O00308 870 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 TFECO14948 347 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 PEX1O43933 1283 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 OR10H2O60403 315 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 ABHD2P08910 425 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 ABOP16442 354 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 TAC1P20366 129 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 CA7P43166 264 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 STT3AP46977 705 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 MEOX1P50221 254 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 NEK2P51955 445 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 TNFRSF17Q02223 184 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 TEX35Q5T0J7 233 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 MILR1Q7Z6M3 343 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 NUDT13Q86X67 352 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 OR4N5Q8IXE1 308 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 GHDCQ8N2G8 530 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 CPSF7Q8N684 471 aaKnown RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 OR8K3Q8NH51 312 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 SLC2A12Q8TD20 617 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 ANKRD9Q96BM1 317 aaPredicted RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 MTFMTQ96DP5 389 aaKnown RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 CDK15Q96Q40 435 aa12.78□□□□□ -0.36
CXCL12-205ENST00000395794 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
CXCL12-205ENST00000395794 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms