RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GPLD1P80108 840 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 CHRNB3Q05901 458 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 NKG7Q16617 165 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 VMACQ2NL98 169 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 TMEM35AQ53FP2 167 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 NHSL2Q5HYW2 709 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 ARMC6Q6NXE6 501 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 PIP4P1Q86T03 277 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 ADGRF3Q8IZF5 1079 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 NCSTNQ92542 709 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 NTN4Q9HB63 628 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 SPHK1Q9NYA1 384 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 VPS4AQ9UN37 437 aa14.34□□□□□ -0.11
SCAF11-204ENST00000395454 ARHGAP10A1A4S6 786 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 FAM149AA5PLN7 773 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 ISM1B1AKI9 464 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 CLOCKO15516 846 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 NDUFS4O43181 175 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 LCMT2O60294 686 aaKnown RBP14.33□□□□□ -0.11
SCAF11-204ENST00000395454 TPST1O60507 370 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 DEAF1O75398 565 aaPredicted RBP14.33□□□□□ -0.11
SCAF11-204ENST00000395454 IL3P08700 152 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 DDCP20711 480 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 SOX11P35716 441 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 TRA2BP62995 288 aaKnown RBP14.33□□□□□ -0.11
SCAF11-204ENST00000395454 C2orf80Q0P641 193 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 TRIP6Q15654 476 aaKnown RBP14.33□□□□□ -0.11
SCAF11-204ENST00000395454 ZNF621Q6ZSS3 439 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 USP53Q70EK8 1073 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 UBE3DQ7Z6J8 389 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 NUDT13Q86X67 352 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 GALNT4Q8N4A0 578 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 CBR4Q8N4T8 237 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 RGMAQ96B86 450 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 RNF145Q96MT1 663 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 F2RL3Q96RI0 385 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 SEPHS2Q99611 448 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 BDH2Q9BUT1 245 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 ABCG4Q9H172 646 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 SCOCQ9UIL1 159 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 OAZ3Q9UMX2 235 aa14.33□□□□□ -0.11
SCAF11-204ENST00000395454 FEZF1A0PJY2 475 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 OR1F1O43749 312 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CPSF4O95639 269 aaKnown RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 C1QCP02747 245 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 GBAP04062 536 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 RPLP0P05388 317 aaKnown RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 GP1BAP07359 652 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 FRKP42685 505 aaPredicted RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CHN2P52757 468 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 PPP1CAP62136 330 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 HBA1P69905 142 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CCL7P80098 99 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 NRF1Q16656 503 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CCNYL2Q5T2Q4 361 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 ENPP6Q6UWR7 440 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CARM1Q86X55 608 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 APLFQ8IW19 511 aaPredicted RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 FAM47BQ8NA70 645 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 FAM162AQ96A26 154 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 TM4SF18Q96CE8 201 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 ANKRD60Q9BZ19 345 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 AICDAQ9GZX7 198 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 EPB41L1Q9H4G0 881 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 MRPS30Q9NP92 439 aaKnown RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 UBAP1Q9NZ09 502 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 ACTR10Q9NZ32 417 aa14.33□□□□□ -0.12
SCAF11-204ENST00000395454 CDV3Q9UKY7 258 aaKnown RBP14.33□□□□□ -0.12
SCAF11-204ENST00000395454 PIEZO1Q92508 2521 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 A0A1W2PQM1 296 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 LRIT2A6NDA9 550 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 C2orf74A8MZ97 194 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 CD1CP29017 333 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 MAPK12P53778 367 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 MC1RQ01726 317 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 HYAL2Q12891 473 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 RGNQ15493 299 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 PRSS53Q2L4Q9 553 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 OR52E8Q6IFG1 317 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 TMEM154Q6P9G4 183 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 FLVCR1-AS1Q8TAF5 88 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 TFAP2CQ92754 450 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 SLC22A18Q96BI1 424 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 TBC1D20Q96BZ9 403 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 SORBS1Q9BX66 1292 aaKnown RBP14.32□□□□□ -0.12
SCAF11-204ENST00000395454 TAS2R7Q9NYW3 318 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 DNAJB9Q9UBS3 223 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 KLHL3Q9UH77 587 aa14.32□□□□□ -0.12
SCAF11-204ENST00000395454 ATXN7L1Q9ULK2 861 aaPredicted RBP14.32□□□□□ -0.12
SCAF11-204ENST00000395454 SAMD4AQ9UPU9 718 aaKnown RBP14.32□□□□□ -0.12
SCAF11-204ENST00000395454 SAC3D1A6NKF1 404 aa14.31□□□□□ -0.12
SCAF11-204ENST00000395454 PRKD3O94806 890 aa14.31□□□□□ -0.12
SCAF11-204ENST00000395454 SEMG1P04279 462 aa14.31□□□□□ -0.12
SCAF11-204ENST00000395454 UBTFL6P0CB48 400 aaPredicted RBP14.31□□□□□ -0.12
SCAF11-204ENST00000395454 DDX5P17844 614 aaKnown RBP14.31□□□□□ -0.12
SCAF11-204ENST00000395454 CMPK1P30085 196 aa14.31□□□□□ -0.12
SCAF11-204ENST00000395454 GRK3P35626 688 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms