RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PRR14Q9BWN1 585 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 CDCA4Q9BXL8 241 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 SLC12A9Q9BXP2 914 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 FAM83DQ9H4H8 585 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 CDCP1Q9H5V8 836 aa13.66□□□□□ -0.22
CLIP2-203ENST00000395060 IFNW1P05000 195 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 CYP2A6P11509 494 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 POU3F3P20264 500 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 EVI2BP34910 448 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ETV5P41161 510 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ETV1P50549 477 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 LIMK1P53667 647 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TAS2R50P59544 299 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 PIN1Q13526 163 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 Q8N402 240 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 NATD1Q8N6N6 113 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ARL14EPQ8N8R7 260 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 DACT3Q96B18 629 aaPredicted RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TMEM80Q96HE8 168 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 OR4K3Q96R72 315 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 RDH14Q9HBH5 336 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ACOXLQ9NUZ1 547 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 NPAP1Q9NZP6 1156 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 STUB1Q9UNE7 303 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TRPM7Q96QT4 1865 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ISM1B1AKI9 464 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 CASKO14936 926 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 CH25HO95992 272 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 KLK1P06870 262 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 C1SP09871 688 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 MSL3P1P0C860 447 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 SOX18P35713 384 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 OPRD1P41143 372 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ETV6P41212 452 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 XKP51811 444 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 MVDP53602 400 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 DSC1Q08554 894 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
CLIP2-203ENST00000395060 GPR19Q15760 415 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 PRSS53Q2L4Q9 553 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 WSCD2Q2TBF2 565 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 FLYWCH1Q4VC44 716 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 LHFPL3Q86UP9 236 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TMC8Q8IU68 726 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 L3MBTL4Q8NA19 623 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 OR7G3Q8NG95 312 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 OR4M1Q8NGD0 313 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 HCAR2Q8TDS4 363 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 SLC6A18Q96N87 628 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 TTLL2Q9BWV7 592 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 CHST8Q9H2A9 424 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 SLA2Q9H6Q3 261 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ZDHHC3Q9NYG2 299 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 IL20RAQ9UHF4 553 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 SPEF1Q9Y4P9 236 aa13.65□□□□□ -0.22
CLIP2-203ENST00000395060 ARHGEF33A8MVX0 844 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF670-ZNF695F2Z2N8 137 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 RTCAO00442 366 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 CSTF2P33240 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SLC6A12P48065 614 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SLC11A1P49279 550 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 GPR17Q13304 367 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 CLEC12AQ5QGZ9 265 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 FUT10Q6P4F1 479 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 TRIM63Q969Q1 353 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 DCLRE1CQ96SD1 692 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 POLR2J3Q9H1A7 115 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 C3orf14Q9HBI5 128 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SLC23A1Q9UHI7 598 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SH2B3Q9UQQ2 575 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 A0A075B6Q4 140 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 C2orf92A0A1B0GVN3 265 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 DVL2O14641 736 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 PRKYO43930 277 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 ENDOUP21128 410 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 GSTM5P46439 218 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 CTBP2P56545 445 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 RBBP4Q09028 425 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 TEAD4Q15561 434 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 SLC35F1Q5T1Q4 408 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 DDI2Q5TDH0 399 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 CNIH2Q6PI25 160 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 AGTRAPQ6RW13 159 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 IL20RBQ6UXL0 311 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 VN1R5Q7Z5H4 357 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 GRPEL2Q8TAA5 225 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 C9orf43Q8TAL5 461 aaPredicted RBP13.64□□□□□ -0.23
CLIP2-203ENST00000395060 NEIL2Q969S2 332 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 STARD7Q9NQZ5 370 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 TRPM5Q9NZQ8 1165 aa13.64□□□□□ -0.23
CLIP2-203ENST00000395060 NUMA1Q14980 2115 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms