RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CACNG6Q9BXT2 260 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 YARS2Q9Y2Z4 477 aaKnown RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 IQGAP3Q86VI3 1631 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 SLC2A1P11166 492 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ADRB3P13945 408 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 MSX1P28360 303 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 HOXD12P35452 270 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ADH7P40394 386 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 DCUN1D3Q8IWE4 304 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 RAB39BQ96DA2 213 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FAM124BQ9H5Z6 455 aaPredicted RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 SCML2Q9UQR0 700 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TRBV2A0A0J9YWF9 115 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PPP1R2P9O14990 202 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 HTR3BO95264 441 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 RAB6AP20340 208 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TRAM2Q15035 370 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CPT1BQ92523 772 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 SNX18Q96RF0 628 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 A0A1W2PPM1 405 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 A0A1W2PRB8 838 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 GAAP10253 952 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 MGST1P10620 155 aaKnown RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 DPEP1P16444 411 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 KCNJ5P48544 419 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TRAPPC6BQ86SZ2 158 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TICAM1Q8IUC6 712 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FAM156AQ8NDB6 213 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CHDHQ8NE62 594 aaPredicted RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 ANKK1Q8NFD2 765 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CHAC2Q8WUX2 184 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 GLOD4Q9HC38 313 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 TDP1Q9NUW8 608 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 DLGAP4Q9Y2H0 992 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 SLC22A5O76082 557 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 IGKV5-2P06315 115 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 INSRRP14616 1297 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 PPA1Q15181 289 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CEACAM19Q7Z692 300 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 ST7LQ8TDW4 575 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CDC7O00311 574 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 LATO43561 262 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 C1RP00736 705 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 CSF1P09603 554 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 RXRBP28702 533 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 RFC3P40938 356 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 C10orf62Q5T681 223 aaPredicted RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 PNCKQ6P2M8 343 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 MYOZ2Q9NPC6 264 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 FAM212BQ9NTI7 297 aaPredicted RBP12.94□□□□□ -0.34
USP49-203ENST00000394253 C14orf119Q9NWQ9 140 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
USP49-203ENST00000394253 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 OR4D6Q8NGJ1 314 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ZCCHC10Q8TBK6 192 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 HAVCR2Q8TDQ0 301 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ZNF442Q9H7R0 627 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 TAS2R16Q9NYV7 291 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 JUNDP17535 347 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CELP19835 753 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PLA2G16P53816 162 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ESCO2Q56NI9 601 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 HACD2Q6Y1H2 254 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 DEFB128Q7Z7B8 93 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 NRSN1Q8IZ57 195 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 OR4K17Q8NGC6 315 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PRRT1Q99946 306 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 USB1Q9BQ65 265 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 TPPPO94811 219 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CSNK2A2P19784 350 aaPredicted RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 IMPDH1P20839 514 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PLGLB1Q02325 96 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TMEM35AQ53FP2 167 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PIGWQ7Z7B1 504 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 IQCKQ8N0W5 287 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 UBXN10Q96LJ8 280 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 RXFP3Q9NSD7 469 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 GTF3C1Q12789 2109 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 PABPC4LP0CB38 370 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 ENGP17813 658 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 NUDT6P53370 316 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CAMK2DQ13557 499 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 MEF2DQ14814 521 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms