RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FAM47E-STBD1D6RA91 191 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 CTNSO60931 367 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 GABRA1P14867 456 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 FOSL1P15407 271 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 DNASE1P24855 282 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 FNTAP49354 379 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 HNMTP50135 292 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 MTTPP55157 894 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 FLYWCH1Q4VC44 716 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 ULK2Q8IYT8 1036 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 NAXEQ8NCW5 288 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF721Q8TF20 911 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 ANKRD7Q92527 254 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 RHBDF1Q96CC6 855 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 TMEM79Q9BSE2 394 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 ALOXE3Q9BYJ1 711 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 PSAT1Q9Y617 370 aa14.18□□□□□ -0.14
CHMP3-202ENST00000393773 FN1P02751 2386 aaKnown RBP14.18□□□□□ -0.14
CHMP3-202ENST00000393773 ZANQ9Y493 2812 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PGRMC1O00264 195 aaKnown RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PRAMEF4O60810 478 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 LDB3O75112 727 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ETHE1O95571 254 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 P04436 131 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 RFPL3SP0C7P2 107 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PIGAP37287 484 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PEX19P40855 299 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ASCL1P50553 236 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 SLC10A1Q14973 349 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 EFTUD2Q15029 972 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 TSNQ15631 228 aaKnown RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 MPEG1Q2M385 716 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF791Q3KP31 576 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PRAMEF9Q5VWM5 478 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 STEAP4Q687X5 459 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 LYPD8Q6UX82 237 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF793Q6ZN11 406 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ADAMTSL2Q86TH1 951 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 C9orf40Q8IXQ3 194 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 KRT78Q8N1N4 520 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 FBXW8Q8N3Y1 598 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 GRK7Q8WTQ7 553 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PITHD1Q9GZP4 211 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 SLC6A15Q9H2J7 730 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 LDAHQ9H6V9 325 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 COPS7BQ9H9Q2 264 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PRDM7Q9NQW5 492 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 PCDHGB3Q9Y5G1 929 aa14.17□□□□□ -0.14
CHMP3-202ENST00000393773 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.17□□□□□ -0.14
CHMP3-202ENST00000393773 KDM4EB2RXH2 506 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 SYT5O00445 386 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 CD22P20273 847 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 UQCRC1P31930 480 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 HPDP32754 393 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 IGLV3-21P80748 117 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 ASPHQ12797 758 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 STX4Q12846 297 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 SERTAD2Q14140 314 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 FBXL19-AS1Q494R0 122 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 POMZP3Q6PJE2 187 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 FRA10AC1Q70Z53 315 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 UBE3DQ7Z6J8 389 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 ZC3HC1Q86WB0 502 aaKnown RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 LRRC25Q8N386 305 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 NKAPQ8N5F7 415 aaKnown RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 OR5L2Q8NGL0 311 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 PAQR8Q8TEZ7 354 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 FAM222BQ8WU58 562 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 CFAP36Q96G28 342 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 PBKQ96KB5 322 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 MAPKAP1Q9BPZ7 522 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 EHD1Q9H4M9 534 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 EXO5Q9H790 373 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 PROK2Q9HC23 129 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 LYRM4Q9HD34 91 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 PPANQ9NQ55 473 aaKnown RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 GPRC5BQ9NZH0 403 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 ZNF490Q9ULM2 529 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-202ENST00000393773 CHMP2BQ9UQN3 213 aa14.16□□□□□ -0.14
CHMP3-202ENST00000393773 ANKDD1BA6NHY2 528 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 HSPB2A8KAH6 182 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ATE1O95260 518 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 IGKV3-11P04433 115 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 BMP5P22003 454 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ELK3P41970 407 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 KCNC1P48547 511 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 WNT3P56703 355 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ID2Q02363 134 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 RCN2Q14257 317 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 HSPB2Q16082 182 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 ACSF3Q4G176 576 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 PIGGQ5H8A4 983 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 HP1BP3Q5SSJ5 553 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-202ENST00000393773 PRAMEF20Q5VT98 475 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 CAMKMTQ7Z624 323 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 WFDC11Q8NEX6 87 aa14.15□□□□□ -0.14
CHMP3-202ENST00000393773 NEIL3Q8TAT5 605 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms