RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 C18orf63Q68DL7 685 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 ZCCHC23Q6ZST2 131 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 PTRH1Q86Y79 214 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 ZNF843Q8N446 348 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 C1orf52Q8N6N3 182 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TEX19Q8NA77 164 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 ALOXE3Q9BYJ1 711 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TNFRSF12AQ9NP84 129 aa17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 PNO1Q9NRX1 252 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TLN1Q9Y490 2541 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 TNRC6AQ8NDV7 1962 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-204ENST00000393546 COL6A6A6NMZ7 2263 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 A0A1W2PR48 441 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 DPM1O60762 260 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 LDB3O75112 727 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 CHEK2O96017 543 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 IFNA16P05015 189 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 CELA2AP08217 269 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 FGF4P08620 206 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 ITGAMP11215 1152 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 NEFHP12036 1026 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 PPP2R1BP30154 601 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 MAPK12P53778 367 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 SLC26A5P58743 744 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 HMGCS1Q01581 520 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 BTKQ06187 659 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 ACSM2AQ08AH3 577 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 C19orf57Q0VDD7 668 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 SPIN4Q56A73 249 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 SPDYAQ5MJ70 313 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 AGBL2Q5U5Z8 902 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 HHATQ5VTY9 493 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 ACSM2BQ68CK6 577 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 CLEC6AQ6EIG7 209 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 TRIM46Q7Z4K8 759 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 CLYBLQ8N0X4 340 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 BRIX1Q8TDN6 353 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 TM9SF4Q92544 642 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 TLCD1Q96CP7 247 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 PKNOX2Q96KN3 472 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 PAIP2Q9BPZ3 127 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 MMP25Q9NPA2 562 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 TRAF6Q9Y4K3 522 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 CLDN16Q9Y5I7 305 aa17.79■□□□□ 0.44
PDLIM7-204ENST00000393546 SAGE2PA6NJ88 616 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 TGFBR3LH3BV60 316 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 C1QL1O75973 258 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 CHRNGP07510 517 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 DHRS4L1P0CG22 281 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 NR2F6P10588 404 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 TRA2BP62995 288 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 KLRB1Q12918 225 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 CRB2Q5IJ48 1285 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 ISLR2Q6UXK2 745 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 TMEM132CQ8N3T6 1108 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 ANKRD42Q8N9B4 389 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 OR6Y1Q8NGX8 325 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 PSMF1Q92530 271 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 ANKRD9Q96BM1 317 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 LMF1Q96S06 567 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 EPS8L2Q9H6S3 715 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 KCNK13Q9HB14 408 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 ADAP2Q9NPF8 381 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 PTGFRNQ9P2B2 879 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 VTI1BQ9UEU0 232 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 FIS1Q9Y3D6 152 aa17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 HEMK1Q9Y5R4 338 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-204ENST00000393546 SPTA1P02549 2419 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 MYOCOSA0A1B0GUC4 107 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 TMEM120BA0PK00 339 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 A8MUI8 341 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 B8ZZF3 427 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 SLC28A1O00337 649 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 FGF17O60258 216 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 MYO1DO94832 1006 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 GPR75O95800 540 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 AIFM1O95831 613 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 SERPINE1P05121 402 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 TNNI3P19429 210 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 SLC18A1P54219 525 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 ID2Q02363 134 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 TERF2Q15554 542 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 ELAVL1Q15717 326 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 CHI3L2Q15782 390 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 IGFL3Q6UXB1 125 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 OR4N5Q8IXE1 308 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 ZADH2Q8N4Q0 377 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 SIRT6Q8N6T7 355 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 AMER2Q8N7J2 671 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 NFAM1Q8NET5 270 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 TM4SF18Q96CE8 201 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 APIPQ96GX9 242 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 VIPAS39Q9H9C1 493 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 TEKT2Q9UIF3 430 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 MCM8Q9UJA3 840 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 CLCA3PQ9Y6N3 262 aa17.77■□□□□ 0.44
PDLIM7-204ENST00000393546 GLOD5A6NK44 160 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 PGRMC2O15173 223 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 RGS14O43566 566 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 PRKRAO75569 313 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms