RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 HLA-DQA2P01906 255 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ZNF19P17023 458 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 PREPP48147 710 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SLC35F1Q5T1Q4 408 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 RGMBQ6NW40 437 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SLC35G5Q96KT7 338 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 PSD2Q9BQI7 771 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 MGAT4BQ9UQ53 548 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SHROOM3Q8TF72 1996 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 OR2A25A4D2G3 310 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 MRPS14O60783 128 aaKnown RBP13.66□□□□□ -0.22
RTF1-201ENST00000389629 TACR1P25103 407 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 RPL35P42766 123 aaKnown RBP13.66□□□□□ -0.22
RTF1-201ENST00000389629 MAGEA11P43364 429 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 REEP3Q6NUK4 255 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 HSDL2Q6YN16 418 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ENTHD1Q8IYW4 607 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 DNAJC5GQ8N7S2 189 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 PLCL2Q9UPR0 1127 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 FOCADQ5VW36 1801 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 TMEM88BA6NKF7 163 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 H7C2Y5 167 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 RFPL3O75679 317 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 RPN2P04844 631 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 NUDT7P0C024 238 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 GPR17Q13304 367 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SNTA1Q13424 505 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 FAM205BPQ63HN1 556 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 UBE2Q1Q7Z7E8 422 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 RNF175Q8N4F7 328 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 MARK1Q9P0L2 795 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 IL17CQ9P0M4 197 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ERVW-1Q9UQF0 538 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ASB1Q9Y576 335 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 COCHO43405 550 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 MNDAP41218 407 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 HK3P52790 923 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 PSMA6P60900 246 aaKnown RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 BTN1A1Q13410 526 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 EIF4HQ15056 248 aaKnown RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 HSD17B12Q53GQ0 312 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 FRRS1Q6ZNA5 592 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 TPRG1Q6ZUI0 275 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 CHCHD4Q8N4Q1 142 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 OR2AP1Q8NGE2 309 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 IFT27Q9BW83 186 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 C11orf54Q9H0W9 315 aaPredicted RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 CD93Q9NPY3 652 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 FKBP7Q9Y680 259 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SLC9A5Q14940 896 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 MICAQ29983 383 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 XKR7Q5GH72 579 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 CHST9Q7L1S5 443 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 RPLP0P6Q8NHW5 317 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 RBCK1Q9BYM8 510 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SLC6A15Q9H2J7 730 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 OR14I1A6ND48 311 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 PRMT3O60678 531 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 RB1P06400 928 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 ELNP15502 786 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 CDKN2CP42773 168 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 TGM3Q08188 693 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 FAPQ12884 760 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 C4orf46Q504U0 113 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 CREB3L1Q96BA8 519 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SECISBP2Q96T21 854 aaKnown RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 AIF1LQ9BQI0 150 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 NMNAT1Q9HAN9 279 aaPredicted RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 PCDHGB2Q9Y5G2 931 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 ALG5Q9Y673 324 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 A0A075B6Q4 140 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 RIIAD1A6NNX1 92 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 GRM6O15303 877 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SLAMF1Q13291 335 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 DOC2AQ14183 400 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SPRYD7Q5W111 196 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 BEST4Q8NFU0 473 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SLC7A6Q92536 515 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 COQ10AQ96MF6 247 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
RTF1-201ENST00000389629 PSORS1C1Q9UIG5 152 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 SPACA6W5XKT8 324 aa13.65□□□□□ -0.22
RTF1-201ENST00000389629 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 REM1O75628 298 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 APEX1P27695 318 aaKnown RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 PGFP49763 221 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 ZNF791Q3KP31 576 aaPredicted RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 SFRP4Q6FHJ7 346 aaPredicted RBP13.64□□□□□ -0.23
RTF1-201ENST00000389629 TMEM179BQ7Z7N9 219 aa13.64□□□□□ -0.23
RTF1-201ENST00000389629 SPERTQ8NA61 448 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms