RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SPRED2Q7Z698 418 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 SDR16C5Q8N3Y7 309 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF740Q8NDX6 193 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DAZLQ92904 295 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DTNBP1Q96EV8 351 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 INPP5KQ9BT40 448 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 GVINP1Q7Z2Y8 2422 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 E2F3O00716 465 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 RDH16O75452 317 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF888P0CJ79 500 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 GSTT1P30711 240 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 KCNC4Q03721 635 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 SMAD4Q13485 552 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DCP2Q8IU60 420 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 RFKQ969G6 155 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 COPS4Q9BT78 406 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 FGF22Q9HCT0 170 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 SERINC1Q9NRX5 453 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 EHD3Q9NZN3 535 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 PLEKHM1Q9Y4G2 1056 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 A0A0J9YY10 115 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 HMX2A2RU54 273 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 POM121BA6NF01 834 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 C2CD4DB7Z1M9 353 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 TRAPPC6AO75865 159 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ATP1A4Q13733 1029 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CGB2Q6NT52 195 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SBSNQ6UWP8 590 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CARM1Q86X55 608 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 PPP1R14AQ96A00 147 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 KCNK13Q9HB14 408 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 RSL24D1Q9UHA3 163 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SEC16AO15027 2179 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM202A6NGA9 273 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 HCRTR2O43614 444 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 NUDT6P53370 316 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ADPRHP54922 357 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 TAS2R38P59533 333 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CCSMST1Q4G0I0 132 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 METTL2BQ6P1Q9 378 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 LARP4Q71RC2 724 aaKnown RBP eCLIP12.5□□□□□ -0.417e-7■■■■□ 20.8
PTPRN2-202ENST00000389416 OR5K2Q8NHB8 316 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SLC6A18Q96N87 628 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 TBX5Q99593 518 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 PCDHB14Q9Y5E9 798 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SCO2O43819 266 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CLIC3O95833 236 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 HTR1EP28566 365 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM52BQ4KMG9 183 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SHISA6Q6ZSJ9 500 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 RIT1Q92963 219 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 MOAP1Q96BY2 351 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 PDXPQ96GD0 296 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ZBTB20Q9HC78 741 aaPredicted RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 NME4O00746 187 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ARHGEF9O43307 516 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 MPZL2O60487 215 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CSTAP01040 98 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 HK3P52790 923 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 RPP38P78345 283 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 HENMT1Q5T8I9 393 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SLC44A3Q8N4M1 653 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 OR2L5Q8NG80 312 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SUN3Q8TAQ9 357 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 CIDECQ96AQ7 238 aaPredicted RBP12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF451Q9Y4E5 1061 aa12.5□□□□□ -0.41
PTPRN2-202ENST00000389416 SGK494L7N484 410 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 AQP9O43315 295 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 NDUFV2P19404 249 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 CBLP22681 906 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 RBBP4Q09028 425 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 SPRED3Q2MJR0 410 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 ADAMTSL4Q6UY14 1074 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 HSDL2Q6YN16 418 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 MCATQ8IVS2 390 aaKnown RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 CAPN14A8MX76 684 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 IFI30P13284 250 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 MYL9P24844 172 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 PLGLB1Q02325 96 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM207Q6UWW9 146 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 IZUMO1Q8IYV9 350 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms