RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 HIST1H2AHQ96KK5 128 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 JSRP1Q96MG2 331 aaPredicted RBP15.92■□□□□ 0.14
HMGN1-203ENST00000380748 NDNQ99608 321 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 TIMP4Q99727 224 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 HIST1H2AJQ99878 128 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 H2AFJQ9BTM1 129 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 TSGA10Q9BZW7 698 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 HOMER3Q9NSC5 361 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 MRPS33Q9Y291 106 aaKnown RBP15.92■□□□□ 0.14
HMGN1-203ENST00000380748 COMMD10Q9Y6G5 202 aa15.92■□□□□ 0.14
HMGN1-203ENST00000380748 CES2O00748 559 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 ERI3O43414 337 aaKnown RBP15.91■□□□□ 0.14
HMGN1-203ENST00000380748 BMP7P18075 431 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 TPSB2P20231 275 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 HNRNPH1P31943 449 aaKnown RBP15.91■□□□□ 0.14
HMGN1-203ENST00000380748 RGS4P49798 205 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 TPSAB1Q15661 275 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 PIGGQ5H8A4 983 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 SEL1L2Q5TEA6 688 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 PAQR3Q6TCH7 311 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 LYPD8Q6UX82 237 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 TMPRSS11BQ86T26 416 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 SYCE1Q8N0S2 351 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 RASGEF1CQ8N431 466 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 GAL3ST3Q96A11 431 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 LINGO1Q96FE5 620 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 RUNDC3BQ96NL0 473 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 TRIB1Q96RU8 372 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 AIF1LQ9BQI0 150 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 RBM24Q9BX46 236 aaKnown RBP15.91■□□□□ 0.14
HMGN1-203ENST00000380748 NPLQ9BXD5 320 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-203ENST00000380748 ALOXE3Q9BYJ1 711 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 PELI2Q9HAT8 420 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 QPCTLQ9NXS2 382 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 GALNT8Q9NY28 637 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 VTI1BQ9UEU0 232 aa15.91■□□□□ 0.14
HMGN1-203ENST00000380748 EIF3LQ9Y262 564 aaKnown RBP15.91■□□□□ 0.14
HMGN1-203ENST00000380748 ZCWPW2A0A1B0GU75 182 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 MBD3L4A6NDZ8 208 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-203ENST00000380748 MBD3L5A6NJ08 208 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-203ENST00000380748 C17orf105B2RV13 164 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 CYR61O00622 381 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 GDF1P27539 372 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 OPRM1P35372 400 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 STXBP1P61764 594 aaKnown RBP15.9■□□□□ 0.14
HMGN1-203ENST00000380748 MPEG1Q2M385 716 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 NXPE4Q6UWF7 544 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.9■□□□□ 0.14
HMGN1-203ENST00000380748 ISL2Q96A47 359 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 FBXL8Q96CD0 374 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 MS4A6EQ96DS6 147 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 QRFPRQ96P65 431 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 CCL19Q99731 98 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 PRDM14Q9GZV8 571 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 C6orf203Q9P0P8 240 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-203ENST00000380748 FBXO5Q9UKT4 447 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 CAMK2AQ9UQM7 478 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 NPFFR2Q9Y5X5 522 aa15.9■□□□□ 0.14
HMGN1-203ENST00000380748 MBD3L3A6NE82 208 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 CD8B2A6NJW9 211 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 B3GALT2O43825 422 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 CTNSO60931 367 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 IPO7O95373 1038 aaKnown RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 ETHE1O95571 254 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 CNOT4O95628 575 aaKnown RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 GUCA1CO95843 209 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 TNNI3P19429 210 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 CDK16Q00536 496 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 C4orf22Q6V702 233 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 RAD9BQ6WBX8 426 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 LUZP2Q86TE4 346 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 KLHDC8AQ8IYD2 350 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 PM20D2Q8IYS1 436 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 C9orf106Q8NAJ2 232 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 OR10G3Q8NGC4 313 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 MBD3L2Q8NHZ7 208 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 PPP1R14CQ8TAE6 165 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 ZNF721Q8TF20 911 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 SPACA9Q96E40 222 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 UBTD1Q9HAC8 227 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 SLC6A5Q9Y345 797 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 DYRK1BQ9Y463 629 aa15.89■□□□□ 0.13
HMGN1-203ENST00000380748 CHCHD2Q9Y6H1 151 aaPredicted RBP15.89■□□□□ 0.13
HMGN1-203ENST00000380748 ANK2Q01484 3957 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 SYNDIG1LA6NDD5 238 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 PABPN1LA6NDY0 278 aaKnown RBP15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CASKO14936 926 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 SIAH2O43255 324 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 LDB3O75112 727 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 ERN1O75460 977 aaKnown RBP15.88■□□□□ 0.13
HMGN1-203ENST00000380748 IL18BPO95998 194 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CERS1P27544 350 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CPA2P48052 419 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 PLA2G16P53816 162 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 CDKN2DP55273 166 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 LIM2P55344 173 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 AP1S2P56377 157 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 ID2Q02363 134 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 KRTAP1-1Q07627 177 aa15.88■□□□□ 0.13
HMGN1-203ENST00000380748 STX4Q12846 297 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms