RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 VWA5B1Q5TIE3 1220 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 FAM219BQ5XKK7 198 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 PAPD4Q6PIY7 484 aaKnown RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 QSOX2Q6ZRP7 698 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CDYL2Q8N8U2 506 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 BANPQ8N9N5 519 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 TEX19Q8NA77 164 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ADAMTS18Q8TE60 1221 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SELENOMQ8WWX9 145 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SMC6Q96SB8 1091 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF382Q96SR6 550 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 CSF3RQ99062 836 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SERPINI1Q99574 410 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 LPAR4Q99677 370 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 TUBB6Q9BUF5 446 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 LHPPQ9H008 270 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 LYRM4Q9HD34 91 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 MLXIPLQ9NP71 852 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 NECTIN3Q9NQS3 549 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 PRTFDC1Q9NRG1 225 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 MKS1Q9NXB0 559 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 FBXW2Q9UKT8 454 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 DAPP1Q9UN19 280 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SNX6Q9UNH7 406 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 MRPS33Q9Y291 106 aaKnown RBP8.67□□□□□ -1.02
HMGN1-202ENST00000380747 STK38LQ9Y2H1 464 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 PLLPQ9Y342 182 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 SPACA6W5XKT8 324 aa8.67□□□□□ -1.02
HMGN1-202ENST00000380747 A0A1W2PQ72 361 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 A8MUA0 341 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 EEDO75530 441 aaKnown RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 CRCPO75575 148 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PDYNP01213 254 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 KRT6AP02538 564 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 KRT6BP04259 564 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PRR35P0CG20 571 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ICAM2P13598 275 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 HMOX2P30519 316 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 KRT6CP48668 564 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 HNRNPFP52597 415 aaKnown RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PKNOX1P55347 436 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SOX8P57073 446 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 DNAJB13P59910 316 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 KLRB1Q12918 225 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SLAMF1Q13291 335 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 CUL3Q13618 768 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 BTBD16Q32M84 506 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 NADK2Q4G0N4 442 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ARSJQ5FYB0 599 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 TCHHL1Q5QJ38 904 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 AGAP7PQ5VUJ5 663 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 CLNKQ7Z7G1 428 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 C10orf107Q8IVU9 208 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM52Q8NDY8 209 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 MYRIPQ8NFW9 859 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 METTL6Q8TCB7 284 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 BRIX1Q8TDN6 353 aaKnown RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 TM9SF4Q92544 642 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 HSH2DQ96JZ2 352 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 IMMP1LQ96LU5 166 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 AGAP4Q96P64 663 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ZIM3Q96PE6 472 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 HBEGFQ99075 208 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SMAD5Q99717 465 aaKnown RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 MAPKAP1Q9BPZ7 522 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SLC29A3Q9BZD2 475 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 GSTO2Q9H4Y5 243 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF552Q9H707 407 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 MID1IP1Q9NPA3 183 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 FARSBQ9NSD9 589 aaKnown RBP8.66□□□□□ -1.02
HMGN1-202ENST00000380747 OXSMQ9NWU1 459 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PSD3Q9NYI0 1048 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 C5AR2Q9P296 337 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PTGFRNQ9P2B2 879 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SLC17A7Q9P2U7 560 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SLC12A4Q9UP95 1085 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 MMACHCQ9Y4U1 282 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 PCDHGB7Q9Y5F8 929 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 SCN3AQ9NY46 2000 aa8.66□□□□□ -1.02
HMGN1-202ENST00000380747 OTOGQ6ZRI0 2925 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 CCDC88CQ9P219 2028 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 IGKV3D-11A0A0A0MRZ8 115 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 MYOCOSA0A1B0GUC4 107 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 CCDC151A5D8V7 595 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 A8MUI8 341 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 MANBAO00462 879 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 CYR61O00622 381 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 DPM1O60762 260 aa8.65□□□□□ -1.02
HMGN1-202ENST00000380747 CTNSO60931 367 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms