RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DCTN4Q9UJW0 460 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 C3orf18Q9UK00 162 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 TGFBR3LH3BV60 316 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 PRMT3O60678 531 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 ALDOCP09972 364 aaKnown RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 NR2F6P10588 404 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 ACPPP15309 386 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 LBPP18428 481 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 TLX1P31314 330 aaPredicted RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 BUD31P41223 144 aaPredicted RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 SEC24CP53992 1094 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 EMP2P54851 167 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 DIO3P55073 304 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 ERVK-8P63133 956 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 MC1RQ01726 317 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 TLE3Q04726 772 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 SMU1Q2TAY7 513 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 LSM12Q3MHD2 195 aaKnown RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 NXNQ6DKJ4 435 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 FAAH2Q6GMR7 532 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 CLNKQ7Z7G1 428 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 ZNF595Q8IYB9 648 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 LIX1Q8N485 282 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 CLHC1Q8NHS4 586 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 CDC26Q8NHZ8 85 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 CHMP6Q96FZ7 201 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 C5AR2Q9P296 337 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 MRPS33Q9Y291 106 aaKnown RBP11.91□□□□□ -0.5
SMN1-202ENST00000380707 PCDHA9Q9Y5H5 950 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 CLDN16Q9Y5I7 305 aa11.91□□□□□ -0.5
SMN1-202ENST00000380707 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 CLDN4O14493 209 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 NKX2-8O15522 239 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 CTNSO60931 367 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 LDB3O75112 727 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 G6PDP11413 515 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 ITPKBP27987 946 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 MAPK1P28482 360 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 HSD17B7P56937 341 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 GNGT1P63211 74 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 SF3A3Q12874 501 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMN1-202ENST00000380707 SLC13A2Q13183 592 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 MAD2L1Q13257 205 aaPredicted RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 SSPNQ14714 243 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 PTGR1Q14914 329 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 NSDHLQ15738 373 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TMEM198Q66K66 360 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 OGFOD2Q6N063 350 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 QSOX2Q6ZRP7 698 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 OR4N5Q8IXE1 308 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TMEM132CQ8N3T6 1108 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 PLPP5Q8NEB5 264 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 CEP70Q8NHQ1 597 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TANKQ92844 425 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TSLPQ969D9 159 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 GFM2Q969S9 779 aaKnown RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 ANKRD9Q96BM1 317 aaPredicted RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 PTCHD1Q96NR3 888 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TSSK3Q96PN8 268 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 MYNNQ9NPC7 610 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 PRDM9Q9NQV7 894 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 SEMA3GQ9NS98 782 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 ASIC5Q9NY37 505 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 NOP53Q9NZM5 478 aaKnown RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 CES1P1Q9UKY3 287 aa11.9□□□□□ -0.5
SMN1-202ENST00000380707 EXO1Q9UQ84 846 aaKnown RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 EIF3LQ9Y262 564 aaKnown RBP11.9□□□□□ -0.5
SMN1-202ENST00000380707 NUP210LQ5VU65 1888 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 A0A087WV48 116 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 IGKV3D-11A0A0A0MRZ8 115 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 A0A0G2JND7 137 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 MYOCOSA0A1B0GUC4 107 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 C1orf226A1L170 272 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 BLACEA4D250 179 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 FGF17O60258 216 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 ALOX12BO75342 701 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 LRATO95237 230 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 FURINP09958 794 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMN1-202ENST00000380707 PRPS2P11908 318 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 MMP11P24347 488 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 OTX2P32243 289 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 GSTM5P46439 218 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 ALDH9A1P49189 494 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 ID2Q02363 134 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 C2orf80Q0P641 193 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 ATP1A1-AS1Q5TC04 95 aa11.89□□□□□ -0.51
SMN1-202ENST00000380707 TMEM205Q6UW68 189 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms