RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 HS3ST3A1Q9Y663 406 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 TMEM247A6NEH6 219 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 E9PQ18 207 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 SERPIND1P05546 499 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 IL9P15248 144 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 AKT2P31751 481 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 YAP1P46937 504 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 ANXA11P50995 505 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 STXBP1P61764 594 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 CSNK2BP67870 215 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 KCNC4Q03721 635 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 CTU2Q2VPK5 515 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 MRM1Q6IN84 353 aaKnown RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 ABHD17CQ6PCB6 329 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 MS4A6EQ96DS6 147 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 GABARAPL3Q9BY60 117 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 SIRT3Q9NTG7 399 aaPredicted RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 SCHIP1Q9P0W5 487 aaPredicted RBP21.94■■□□□ 1.1
VPS16-201ENST00000380443 TPRKBQ9Y3C4 175 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 NAALAD2Q9Y3Q0 740 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 PCDHGA4Q9Y5G9 962 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 SNX5Q9Y5X3 404 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 LYVE1Q9Y5Y7 322 aa21.94■■□□□ 1.1
VPS16-201ENST00000380443 HEATR5BQ9P2D3 2071 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 SLC1A7O00341 560 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 MITFO75030 526 aaPredicted RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 CHRM5P08912 532 aaPredicted RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 HIST1H1TP22492 207 aaPredicted RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 NTSP30990 170 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 PXNP49023 591 aaPredicted RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 HMGA2P52926 109 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 PLA2G16P53816 162 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 NUP107P57740 925 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 IL5RAQ01344 420 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 NDUFAF5Q5TEU4 345 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 KIAA1324Q6UXG2 1013 aaKnown RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 TMEM64Q6YI46 380 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 TSEN54Q7Z6J9 526 aaKnown RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 FAM124AQ86V42 546 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 EXOSC8Q96B26 276 aaKnown RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 ISOC1Q96CN7 298 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 C17orf62Q9BQA9 187 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 SLC35C2Q9NQQ7 365 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 TRNAU1APQ9NX07 287 aaKnown RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 TEX10Q9NXF1 929 aaPredicted RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 TBC1D29Q9UFV1 150 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 ENOPH1Q9UHY7 261 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 KLF15Q9UIH9 416 aa21.93■■□□□ 1.1
VPS16-201ENST00000380443 FAM32AQ9Y421 112 aaKnown RBP21.93■■□□□ 1.1
VPS16-201ENST00000380443 HAT1O14929 419 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 IL7RP16871 459 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 JUNDP17535 347 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 RHCEP18577 417 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PEBP1P30086 187 aaKnown RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 CCT3P49368 545 aaKnown RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 CLK3P49761 638 aaKnown RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 RPS15AP62244 130 aaKnown RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 HYAL2Q12891 473 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 NPRL3Q12980 569 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 RAPSNQ13702 412 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 BHLHB9Q6PI77 547 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 GALNT5Q7Z7M9 940 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PLD3Q8IV08 490 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 TMEM145Q8NBT3 493 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 OR4C15Q8NGM1 316 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 OR13F1Q8NGS4 319 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 SFXN5Q8TD22 340 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 MOAP1Q96BY2 351 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 BMFQ96LC9 184 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PHF7Q9BWX1 381 aaPredicted RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 TWSG1Q9GZX9 223 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PRDM7Q9NQW5 492 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 EXD2Q9NVH0 621 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 SCN3BQ9NY72 215 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PCDHGB1Q9Y5G3 927 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 CLDN2P57739 230 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 KIR2DS3Q14952 304 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 SPARTQ8N0X7 666 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 PIP5K1AQ99755 562 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 SEMA3GQ9NS98 782 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 LYARQ9NX58 379 aaKnown RBP21.92■■□□□ 1.1
VPS16-201ENST00000380443 RAB23Q9ULC3 237 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 MMP17Q9ULZ9 603 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 ASB4Q9Y574 426 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 ENPP4Q9Y6X5 453 aa21.92■■□□□ 1.1
VPS16-201ENST00000380443 ARRDC5A6NEK1 342 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ISM1B1AKI9 464 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 MAN2B1O00754 1011 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ERI3O43414 337 aaKnown RBP21.91■■□□□ 1.1
VPS16-201ENST00000380443 SH3BP5O60239 455 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 NOL3O60936 208 aaKnown RBP21.91■■□□□ 1.1
VPS16-201ENST00000380443 SEC14L2O76054 403 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ANGPTL1O95841 491 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 OPN1SWP03999 348 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 TFPTP0C1Z6 253 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 NDUFV2P19404 249 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ATP5A1P25705 553 aaKnown RBP21.91■■□□□ 1.1
VPS16-201ENST00000380443 POLR2IP36954 125 aaKnown RBP21.91■■□□□ 1.1
VPS16-201ENST00000380443 XCR1P46094 333 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 TPMTP51580 245 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms