RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CSNK1G2P78368 415 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 MVKQ03426 396 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 SDE2Q6IQ49 451 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 REEP3Q6NUK4 255 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 SPEM1Q8N4L4 309 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 SVOPQ8N4V2 548 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 ZBED6CLQ96FA7 236 aaPredicted RBP20.47■□□□□ 0.87
TRIM54-202ENST00000380075 CAMK1GQ96NX5 476 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 GABRG3Q99928 467 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 PSD2Q9BQI7 771 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 BTBD1Q9H0C5 482 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 OSGEPL1Q9H4B0 414 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 DDX31Q9H8H2 851 aaKnown RBP20.47■□□□□ 0.87
TRIM54-202ENST00000380075 A4GALTQ9NPC4 353 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 ACSS1Q9NUB1 689 aaPredicted RBP20.47■□□□□ 0.87
TRIM54-202ENST00000380075 EXD2Q9NVH0 621 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 POFUT2Q9Y2G5 429 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 TESMINQ9Y4I5 508 aa20.47■□□□□ 0.87
TRIM54-202ENST00000380075 ZNF99A8MXY4 864 aaPredicted RBP20.46■□□□□ 0.87
TRIM54-202ENST00000380075 OR1F1O43749 312 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PSMB5P28074 263 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PKLRP30613 574 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PCBP4P57723 403 aaKnown RBP20.46■□□□□ 0.87
TRIM54-202ENST00000380075 MLC1Q15049 377 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 TMEM35AQ53FP2 167 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 FGD3Q5JSP0 725 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 KIAA1211LQ6NV74 962 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 DUS1LQ6P1R4 473 aaKnown RBP20.46■□□□□ 0.87
TRIM54-202ENST00000380075 TMEM92Q6UXU6 159 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 OR10G2Q8NGC3 310 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 CCDC90BQ9GZT6 254 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PLGRKTQ9HBL7 147 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 TAS2R7Q9NYW3 318 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 A0A1W2PQF6 199 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 TRBC2A0A5B9 178 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 FEZF1A0PJY2 475 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PRR19A6NJB7 356 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 XPNPEP2O43895 674 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 KDM1AO60341 852 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 HOXB2P14652 356 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 AVPR2P30518 371 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 SPIBQ01892 262 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 MICAQ29983 383 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 EOGTQ5NDL2 527 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 SYT13Q7L8C5 426 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 MMP21Q8N119 569 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PIP5K1AQ99755 562 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 LHX9Q9NQ69 397 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 FBXL12Q9NXK8 326 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 ENOPH1Q9UHY7 261 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 ZNF451Q9Y4E5 1061 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 SNX8Q9Y5X2 465 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 TRPM6Q9BX84 2022 aa20.46■□□□□ 0.87
TRIM54-202ENST00000380075 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 RTCAO00442 366 aaKnown RBP20.45■□□□□ 0.86
TRIM54-202ENST00000380075 PDE9AO76083 593 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 CEACAM5P06731 702 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 DRD2P14416 443 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 COL9A1P20849 921 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 FMO3P31513 532 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 HMGA2P52926 109 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ARFIP1P53367 373 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 CASP9P55211 416 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ABATP80404 500 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 KCNC4Q03721 635 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 CEACAM20Q6UY09 585 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ANKRD13BQ86YJ7 626 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 PSMA8Q8TAA3 256 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 GANCQ8TET4 914 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 SLC17A9Q9BYT1 436 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ZSCAN32Q9NX65 697 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 EHD3Q9NZN3 535 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 WARS2Q9UGM6 360 aaKnown RBP20.45■□□□□ 0.86
TRIM54-202ENST00000380075 FAM32AQ9Y421 112 aaKnown RBP20.45■□□□□ 0.86
TRIM54-202ENST00000380075 WDFY4Q6ZS81 3184 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ARRDC5A6NEK1 342 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 NDUFS2O75306 463 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 GRK3P35626 688 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 MAGEA8P43361 318 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 XCR1P46094 333 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ALDH9A1P49189 494 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 TEKQ02763 1124 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 EMX1Q04741 257 aaPredicted RBP20.45■□□□□ 0.86
TRIM54-202ENST00000380075 NPTX1Q15818 432 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 TMEM31Q5JXX7 168 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 OR2A1Q8NGT9 310 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 FAR1Q8WVX9 515 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 RORBQ92753 470 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 FKBP10Q96AY3 582 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 FEVQ99581 238 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 IMP3Q9NV31 184 aaKnown RBP20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ENPP5Q9UJA9 477 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 ENPP4Q9Y6X5 453 aa20.45■□□□□ 0.86
TRIM54-202ENST00000380075 A0A1B0GVG6 124 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 A0A1W2PQU0 124 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 C5orf58C9J3I9 102 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 BCL10O95999 233 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 DNTTP04053 509 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 FUCA1P04066 466 aa20.44■□□□□ 0.86
TRIM54-202ENST00000380075 RHCEP18577 417 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms