RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ACTRT2Q8TDY3 377 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 BORCS5Q969J3 196 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 C12orf43Q96C57 262 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SEPHS2Q99611 448 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SPATA5L1Q9BVQ7 753 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZCCHC3Q9NUD5 404 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PRODH2Q9UF12 536 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZDHHC2Q9UIJ5 367 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TCAF1Q9Y4C2 921 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 A0A0U1RQS6 177 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PDLIM1O00151 329 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PRICKLE3O43900 615 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 DNAJA2O60884 412 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RDH16O75452 317 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CLDN9O95484 217 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 KLKB1P03952 638 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CRYBA1P05813 215 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CAPN1P07384 714 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 C1SP09871 688 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SFTPDP35247 375 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 BCAP31P51572 246 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 STARD6P59095 220 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 TGFBR3Q03167 851 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PAPD4Q6PIY7 484 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 OR4N5Q8IXE1 308 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CCDC116Q8IYX3 515 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 EXD3Q8N9H8 876 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PSMA8Q8TAA3 256 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 DTD2Q96FN9 168 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SEMA6CQ9H3T2 930 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 EHD1Q9H4M9 534 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NECTIN3Q9NQS3 549 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SLC2A6Q9UGQ3 507 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF490Q9ULM2 529 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 FOCADQ5VW36 1801 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 hCG_1807616A0A1W2PRN6 198 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 TLCD2A6NGC4 264 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NOTOA8MTQ0 251 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 J3QKU1 62 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RASAL1O95294 804 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF23P17027 643 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 HOXD11P31277 338 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 EIF1AXP47813 144 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 TAS2R39P59534 338 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 MADCAM1Q13477 382 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CATSPEREQ5SY80 951 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CPTPQ5TA50 214 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CLEC6AQ6EIG7 209 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SH2D5Q6ZV89 423 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NEK10Q6ZWH5 1172 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 MAVSQ7Z434 540 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 WFDC8Q8IUA0 241 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CLEC4FQ8N1N0 589 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CLIP4Q8N3C7 705 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 MAGEE2Q8TD90 523 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 KHSRPQ92945 711 aaKnown RBP eCLIP6.25□□□□□ -1.417e-7■□□□□ 10.6
NEDD9-202ENST00000379446 RTP4Q96DX8 246 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PANX1Q96RD7 426 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SORT1Q99523 831 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 WDR77Q9BQA1 342 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 FAIMQ9NVQ4 179 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NFKBIL1Q9UBC1 381 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 EGFL7Q9UHF1 273 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF451Q9Y4E5 1061 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SNX5Q9Y5X3 404 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 DOCK5Q9H7D0 1870 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NPIPB15A6NHN6 443 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 H3BN98 237 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 KPNA4O00629 521 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 UBFD1O14562 309 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 HMGB3O15347 200 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ASNA1O43681 348 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 GABBR2O75899 941 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 S1PR4O95977 384 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 EBLN1P0CF75 366 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SAGP10523 405 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NR2F6P10588 404 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CD9P21926 228 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 S100A1P23297 94 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RFC3P40938 356 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 PNLIPRP1P54315 467 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RAB10P61026 200 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 CD47Q08722 323 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 NIPAL4Q0D2K0 466 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 TGIF1Q15583 401 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 COL28A1Q2UY09 1125 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 MBOAT1Q6ZNC8 495 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 TIFABQ6ZNK6 161 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 BTN2A1Q7KYR7 527 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 GPR180Q86V85 440 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RPS19BP1Q86WX3 136 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 RP9Q8TA86 221 aaKnown RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SLC5A11Q8WWX8 675 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SARAFQ96BY9 339 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF578Q96N58 590 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF559Q9BR84 538 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 SLC39A3Q9BRY0 314 aa6.25□□□□□ -1.41
NEDD9-202ENST00000379446 OR51B5Q9H339 312 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms