RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ARSFP54793 590 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 RAB38P57729 211 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 MTPNP58546 118 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 SPIDRQ14159 915 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 KPNB1Q14974 876 aaKnown RBP23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 CSRP2Q16527 193 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 C18orf63Q68DL7 685 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 PRR23CQ6ZRP0 262 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 CA13Q8N1Q1 262 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 PRSS33Q8NF86 280 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 BBS4Q96RK4 519 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 KCTD14Q9BQ13 255 aaPredicted RBP23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 SEMA4GQ9NTN9 838 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 CES1P1Q9UKY3 287 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 CLCA2Q9UQC9 943 aa23.2■■□□□ 1.3
ECHDC3-201ENST00000379215 GSNP06396 782 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 HBA1P69905 142 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 FLOT2Q14254 428 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 GPR19Q15760 415 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 WDR60Q8WVS4 1066 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 CCDC74BQ96LY2 380 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 TRIM15Q9C019 465 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 SPRTNQ9H040 489 aaPredicted RBP23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 RAD21L1Q9H4I0 556 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 RPF2Q9H7B2 306 aaKnown RBP23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 FGF21Q9NSA1 209 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 NCDNQ9UBB6 729 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 PACSIN3Q9UKS6 424 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 ZNF860A6NHJ4 632 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 A8MUI8 341 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 H3BMH7 237 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 SGK494L7N484 410 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 CLIC1O00299 241 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 CTSBP07858 339 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 FOLR1P15328 257 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 GSK3BP49841 420 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 GTDC1Q4AE62 458 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 PRSS41Q7RTY9 318 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 TMPRSS9Q7Z410 1059 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 NAXDQ8IW45 347 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 OR9A4Q8NGU2 314 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 TANKQ92844 425 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 STMN2Q93045 179 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 NDC1Q9BTX1 674 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 CUTCQ9NTM9 273 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 CDC14AQ9UNH5 594 aa23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 MRPS33Q9Y291 106 aaKnown RBP23.19■■□□□ 1.3
ECHDC3-201ENST00000379215 LAMA1P25391 3075 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 MYO1GB0I1T2 1018 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 PGRMC2O15173 223 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 RDH16O75452 317 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 BCAS2O75934 225 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 LMNAP02545 664 aaKnown RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 RNH1P13489 461 aaKnown RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 CD59P13987 128 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 CSNK2A2P19784 350 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 TCN1P20061 433 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 HTR1EP28566 365 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 PPP2R1BP30154 601 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 MPIP34949 423 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 ABHD18Q0P651 414 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 SPEM2Q0P670 501 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 CEBPEQ15744 281 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 PRSS53Q2L4Q9 553 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 AASDHQ4L235 1098 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 OR1L3Q8NH93 324 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 PSMA8Q8TAA3 256 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 ATOH1Q92858 354 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 ZNF501Q96CX3 271 aaPredicted RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 CDC6Q99741 560 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 SPATA9Q9BWV2 254 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 RASSF4Q9H2L5 321 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 KAT8Q9H7Z6 458 aaKnown RBP23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 TPT1P8Q9HAU6 139 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 SLC6A13Q9NSD5 602 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 C5AR2Q9P296 337 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 SRPK3Q9UPE1 567 aa23.18■■□□□ 1.3
ECHDC3-201ENST00000379215 A0A0A6YYC8 382 aaPredicted RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 GLOD5A6NK44 160 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 I3L1I5 382 aaPredicted RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 FOXS1O43638 330 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 ERAL1O75616 437 aaKnown RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 KRT75O95678 551 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 ABCB1P08183 1280 aaPredicted RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 EFNA1P20827 205 aaPredicted RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 UQCRC2P22695 453 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 SNRPNP63162 240 aaKnown RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 OLR1P78380 273 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 ILKQ13418 452 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 MAP7Q14244 749 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 SERPINA11Q86U17 422 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 BPHLQ86WA6 291 aaPredicted RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 PTRH1Q86Y79 214 aaKnown RBP23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 SLITRK4Q8IW52 837 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 OR4K14Q8NGD5 310 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 ZFP90Q8TF47 636 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 SEMA3GQ9NS98 782 aa23.17■■□□□ 1.3
ECHDC3-201ENST00000379215 SORBS2O94875 1100 aaKnown RBP23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 NCBP2P52298 156 aaKnown RBP eCLIP23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 SHC2P98077 582 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms