RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 KIAA1211LQ6NV74 962 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ENPP7Q6UWV6 458 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CLEC9AQ6UXN8 241 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 BBS12Q6ZW61 710 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 FAM217AQ8IXS0 508 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 THEM6Q8WUY1 208 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 OVCA2Q8WZ82 227 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 RBM18Q96H35 190 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 APOLD1Q96LR9 279 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 A0A1W2PPM1 405 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TMEM235A6NFC5 223 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CYB5BO43169 146 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TPST2O60704 377 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CPT1AP50416 773 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SLC10A1Q14973 349 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 DPYSL2Q16555 572 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 C3orf38Q5JPI3 329 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 FBXL19Q6PCT2 694 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 C16orf59Q7L2K0 433 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TFAP2DQ7Z6R9 452 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 OR10K1Q8NGX5 313 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 COLEC10Q9Y6Z7 277 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PHYHO14832 338 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 RBMS1P29558 406 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 FASLGP48023 281 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 NPBWR1P48145 328 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 BMXP51813 675 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ZNF280AP59817 542 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 GPR85P60893 370 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PPP2CAP67775 309 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 MEP1AQ16819 746 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 METAP1DQ6UB28 335 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 MS4A15Q8N5U1 240 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TOP6BLQ8N6T0 577 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SLAMF9Q96A28 289 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CXorf40BQ96DE9 158 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 BET1LQ9NYM9 111 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 NUP214P35658 2090 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PFKMP08237 780 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 NFYAP23511 347 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 CX3CR1P49238 355 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SORDQ00796 357 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PDZK1IP1Q13113 114 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 GRB10Q13322 594 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 IKBKEQ14164 716 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 NOL9Q5SY16 702 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 C6orf141Q5SZD1 244 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SLC29A4Q7RTT9 530 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CEACAM19Q7Z692 300 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SLC51BQ86UW2 128 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 OR1S1Q8NH92 325 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CELF6Q96J87 481 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 GPATCH2LQ9NWQ4 482 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PURGQ9UJV8 347 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 M0R2Z0 102 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 B3GAT3O94766 335 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 THP07101 528 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 C8GP07360 202 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CTSEP14091 401 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CNR1P21554 472 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 RAB11BQ15907 218 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 C21orf62-AS1Q17RA5 79 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TRNP1Q6NT89 227 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ZNF547Q8IVP9 402 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 OR5M8Q8NGP6 311 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 GRAPLQ8TC17 118 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 PROKR1Q8TCW9 393 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ARHGDIGQ99819 225 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 HHATLQ9HCP6 504 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SERINC1Q9NRX5 453 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 OR6C2Q9NZP2 312 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 VAPAQ9P0L0 249 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 PTPRTO14522 1441 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SHROOM3Q8TF72 1996 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ARHGAP33O14559 1287 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TXNDC12O95881 172 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CKMT2P17540 419 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 AKR1C2P52895 323 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 IL13RA1P78552 427 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 SPHARQ15513 63 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 ZNF551Q7Z340 670 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 GNPDA2Q8TDQ7 276 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 KCNJ9Q92806 393 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TKTL2Q9H0I9 626 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 TDRD3Q9H7E2 651 aaKnown RBP8.43□□□□□ -1.06
LIG3-202ENST00000378526 EMC7Q9NPA0 242 aa8.43□□□□□ -1.06
LIG3-202ENST00000378526 IL17RBQ9NRM6 502 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms