RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 UNQ6126/PRO20091Q6UXV3 157 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 RBM24Q9BX46 236 aaKnown RBP13.56□□□□□ -0.24
TRIM13-202ENST00000378182 CD9P21926 228 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 SEC23BQ15437 767 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 TMEM44Q2T9K0 475 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 RBM20Q5T481 1227 aaKnown RBP13.56□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF550Q7Z398 422 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 CD244Q9BZW8 370 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 OXSMQ9NWU1 459 aa13.56□□□□□ -0.24
TRIM13-202ENST00000378182 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 M0QX08 132 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 HOXB6P17509 224 aaKnown RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 AMY2BP19961 511 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 RORAP35398 523 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 GALNT6Q8NCL4 622 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 THAP4Q8WY91 577 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 ACTR6Q9GZN1 396 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 HIF1ANQ9NWT6 349 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 KCMF1Q9P0J7 381 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 RUNX3Q13761 415 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 MANEAQ5SRI9 462 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF610Q8N9Z0 462 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 DNAJB9Q9UBS3 223 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 KCNC1P48547 511 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 EEF1A2Q05639 463 aaKnown RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NPTX1Q15818 432 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 PAMR1Q6UXH9 720 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 C14orf80Q86SX3 495 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 SLC15A3Q8IY34 581 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 C8orf33Q9H7E9 229 aaPredicted RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 IGSF9Q9P2J2 1179 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 SUSD2Q9UGT4 822 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 RAB26Q9ULW5 256 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 HHLA1C9JL84 531 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 ADAP00813 363 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 ETV5P41161 510 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 TMEM201Q5SNT2 666 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 TRIM73Q86UV7 250 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 PROKR1Q8TCW9 393 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NPRL2Q8WTW4 380 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 MCHR1Q99705 422 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 ACOX3O15254 700 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CDKN3Q16667 212 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CDNFQ49AH0 187 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 C9orf135Q5VTT2 229 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 FCRLBQ6BAA4 426 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 METTL2AQ96IZ6 378 aaKnown RBP13.55□□□□□ -0.24
TRIM13-202ENST00000378182 TMEM74Q96NL1 305 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NANSQ9NR45 359 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 G6PDP11413 515 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CPOXP36551 454 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 GABRA2P47869 451 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 AQP4P55087 323 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 NTHL1P78549 312 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 DPYSL2Q16555 572 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 LTC4SQ16873 150 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 GPR139Q6DWJ6 353 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 PYURFQ96I23 114 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 LRRC3Q9BY71 257 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CWH43Q9H720 699 aa13.55□□□□□ -0.24
TRIM13-202ENST00000378182 CCDC88AQ3V6T2 1871 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 MATN2O00339 956 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 F10P00742 488 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 GNAO1P09471 354 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 FNTBP49356 437 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SHC2P98077 582 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 LYSMD4Q5XG99 296 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 KIAA0930Q6ICG6 404 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 DPY19L3Q6ZPD9 716 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 CPNE8Q86YQ8 564 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 OR51A7Q8NH64 312 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SMOC2Q9H3U7 446 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 ANKRD28O15084 1053 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 IFNA2P01563 188 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 GTF2F2P13984 249 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 NTSR1P30989 418 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 PSPHP78330 225 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 OR51G2Q8NGK0 314 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 EBF4Q9BQW3 602 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 TMEM109Q9BVC6 243 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 NXF5Q9H1B4 397 aaKnown RBP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 MRPL15Q9P015 296 aaKnown RBP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 PCDHGA2Q9Y5H1 932 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 OR6C70A6NIJ9 312 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 EI24O14681 340 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 GCH1P30793 250 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms