RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 AHSA2Q719I0 299 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 FBXL6Q8N531 539 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 CREB3L4Q8TEY5 395 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 APH1BQ8WW43 257 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 OR5P2Q8WZ92 322 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 ZNF566Q969W8 418 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 TMEM19Q96HH6 336 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 RSPO3Q9BXY4 272 aaPredicted RBP18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 RAD21L1Q9H4I0 556 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 MRPS30Q9NP92 439 aaKnown RBP18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 RNF6Q9Y252 685 aa18.28■□□□□ 0.52
PCDHA4-201ENST00000378125 HAT1O14929 419 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 PLRG1O43660 514 aaKnown RBP18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 ADAM23O75077 832 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 IDH2P48735 452 aaKnown RBP18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 PCBP3P57721 371 aaKnown RBP18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 AQP6Q13520 282 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 SPCS2Q15005 226 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 AGERQ15109 404 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 ZNF750Q32MQ0 723 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 KIAA1161Q6NSJ0 714 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 REEP3Q6NUK4 255 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 CCDC80Q76M96 950 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 OR5D16Q8NGK9 328 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 OR4C15Q8NGM1 316 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 FAM81AQ8TBF8 368 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 CDCA3Q99618 268 aaPredicted RBP18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 SYNPO2LQ9H987 977 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 SLC6A20Q9NP91 592 aa18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 SIRT3Q9NTG7 399 aaPredicted RBP18.27■□□□□ 0.52
PCDHA4-201ENST00000378125 LRIT2A6NDA9 550 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 KLF8O95600 359 aaPredicted RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 EML2O95834 649 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 EGFP01133 1207 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 AK4P27144 223 aaPredicted RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NTSR1P30989 418 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 MASP1P48740 699 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 PCBP4P57723 403 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 DMPKQ09013 629 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 MICAQ29983 383 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NDUFAF5Q5TEU4 345 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 SAXO2Q658L1 398 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NLGN4XQ8N0W4 816 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 IL17RCQ8NAC3 791 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 OR8K5Q8NH50 307 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 TBC1D15Q8TC07 691 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 UTP15Q8TED0 518 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 RAB2BQ8WUD1 216 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 GEMIN6Q8WXD5 167 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 DNASE1L2Q92874 299 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 FKBP10Q96AY3 582 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NEURL3Q96EH8 262 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 CNDP2Q96KP4 475 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 ZNF347Q96SE7 839 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 TMEM9Q9P0T7 183 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NAALAD2Q9Y3Q0 740 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 FAM32AQ9Y421 112 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 NINQ8N4C6 2090 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 PRUNE2Q8WUY3 3088 aa18.27■□□□□ 0.51
PCDHA4-201ENST00000378125 SNRNP200O75643 2136 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 ERAL1O75616 437 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 RECKO95980 971 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 HOXB2P14652 356 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 ITIH1P19827 911 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 ALDH4A1P30038 563 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 PKLRP30613 574 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 GPC1P35052 558 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 PRKAG1P54619 331 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 DHRS4L2Q6PKH6 230 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 SLC16A12Q6ZSM3 486 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 VANGL1Q8TAA9 524 aaPredicted RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 RORBQ92753 470 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 QRFPRQ96P65 431 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 TIMM29Q9BSF4 260 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 YIPF4Q9BSR8 244 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 LMAN2LQ9H0V9 348 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 DUSP21Q9H596 190 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 ACER3Q9NUN7 267 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 TICRRQ7Z2Z1 1910 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 GPR89AB7ZAQ6 455 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 ERI3O43414 337 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 BCAS1O75363 584 aaPredicted RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 GADD45GO95257 159 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 BCL10O95999 233 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 IFNA14P01570 189 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 GPR89BP0CG08 455 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 C8orf89P0DMQ9 161 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 JUNDP17535 347 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 CD72P21854 359 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 PSMB9P28065 219 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 PEBP1P30086 187 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 CCT3P49368 545 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 RAB8AP61006 207 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 RPE65Q16518 533 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 DGLUCYQ7Z3D6 616 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 MRPL38Q96DV4 380 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 HSPBAP1Q96EW2 488 aa18.26■□□□□ 0.51
PCDHA4-201ENST00000378125 HRASLS5Q96KN8 279 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms