RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 MAPKAP1Q9BPZ7 522 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 ROGDIQ9GZN7 287 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 DPEP2Q9H4A9 486 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 C5AR2Q9P296 337 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 REV1Q9UBZ9 1251 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 UGT2A1Q9Y4X1 527 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 KLK4Q9Y5K2 254 aa10.41□□□□□ -0.74
BEST1-201ENST00000378043 ISPDA4D126 451 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 MFN2O95140 757 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 BCHEP06276 602 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 DDCP20711 480 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 UGT2B15P54855 530 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 CDC42P60953 191 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 ARHGEF6Q15052 776 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 SSX1Q16384 188 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 C9orf64Q5T6V5 341 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 SAXO2Q658L1 398 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 TCTN3Q6NUS6 607 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 TUBA3EQ6PEY2 450 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 PTCHD4Q6ZW05 846 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 RAB8BQ92930 207 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 TM4SF18Q96CE8 201 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 NEURL3Q96EH8 262 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 CRELD1Q96HD1 420 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 F2RL3Q96RI0 385 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 MGLLQ99685 303 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 NLNQ9BYT8 704 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 ZCCHC2Q9C0B9 1178 aaKnown RBP10.4□□□□□ -0.74
BEST1-201ENST00000378043 LHX9Q9NQ69 397 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
BEST1-201ENST00000378043 ASF1AQ9Y294 204 aa10.4□□□□□ -0.74
BEST1-201ENST00000378043 CAB39Q9Y376 341 aaPredicted RBP10.4□□□□□ -0.74
BEST1-201ENST00000378043 SH3D21A4FU49 640 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 ARHGAP33O14559 1287 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 CNOT3O75175 753 aaKnown RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 ITGB7P26010 798 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 GTF2E2P29084 291 aaKnown RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 BSGP35613 385 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 FEN1P39748 380 aaKnown RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 DPTQ07507 201 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 TP53BP2Q13625 1128 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 MED22Q15528 200 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 PLAG1Q6DJT9 500 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 LCTLQ6UWM7 567 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 NCCRP1Q6ZVX7 275 aaPredicted RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 GRASPQ7Z6J2 395 aaPredicted RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 RBM45Q8IUH3 476 aaKnown RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 KBTBD8Q8NFY9 601 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 OR4D11Q8NGI4 311 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 HTRA1Q92743 480 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 RSPRY1Q96DX4 576 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 TMEM19Q96HH6 336 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 IL4I1Q96RQ9 567 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 TAPBPLQ9BX59 468 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 MIR1-1HGQ9H1L0 117 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 SP140LQ9H930 580 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 SLC25A19Q9HC21 320 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 SIRT3Q9NTG7 399 aaPredicted RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 CNOT2Q9NZN8 540 aaKnown RBP10.4□□□□□ -0.75
BEST1-201ENST00000378043 SPATA7Q9P0W8 599 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 ANKMY1Q9P2S6 941 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 SLC23A2Q9UGH3 650 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 ZNF229Q9UJW7 825 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 TMEM98Q9Y2Y6 226 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 SNX11Q9Y5W9 270 aa10.4□□□□□ -0.75
BEST1-201ENST00000378043 MUC22E2RYF6 1773 aaPredicted RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 EFCAB10A6NFE3 127 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 KIAA0513O60268 411 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 KCNK2O95069 426 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 FGF19O95750 216 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 PRNPP04156 253 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SPNP16150 400 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 CEBPBP17676 345 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 POU1F1P28069 291 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 MAGEA8P43361 318 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 OLR1P78380 273 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 PRKCDQ05655 676 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SELENBP1Q13228 472 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 TSTQ16762 297 aaKnown RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 ZNF181Q2M3W8 571 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 DEPDC1Q5TB30 811 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 KHDRBS2Q5VWX1 349 aaKnown RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ZNF367Q7RTV3 350 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 SLC44A2Q8IWA5 706 aaPredicted RBP10.39□□□□□ -0.75
BEST1-201ENST00000378043 PLA2G15Q8NCC3 412 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 UCN3Q969E3 161 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 UBE2E3Q969T4 207 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 CPNE5Q9HCH3 593 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 A4GALTQ9NPC4 353 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 FZD3Q9NPG1 666 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 GPR34Q9UPC5 381 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 DENND4AQ7Z401 1863 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 TRPM6Q9BX84 2022 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 COL4A3Q01955 1670 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 ANTXRLA6NF34 631 aa10.39□□□□□ -0.75
BEST1-201ENST00000378043 OTOL1A6NHN0 477 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms