RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF782Q6ZMW2 699 aaPredicted RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TMEM17Q86X19 198 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 MFSD6LQ8IWD5 586 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 RIMKLAQ8IXN7 391 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 CEP76Q8TAP6 659 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SUN3Q8TAQ9 357 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SIPA1Q96FS4 1042 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 RPL10LQ96L21 214 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TBX5Q99593 518 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 WRAP53Q9BUR4 548 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 ACPTQ9BZG2 426 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 AKIP1Q9NQ31 210 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 PTTG3PQ9NZH4 202 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SLAMF8Q9P0V8 285 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 COL16A1Q07092 1604 aaPredicted RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 CACNB4O00305 520 aaPredicted RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 DNTTP04053 509 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 PPP2R2BQ00005 443 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TEKQ02763 1124 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 DOC2AQ14183 400 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SF1Q15637 639 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 ALG11Q2TAA5 492 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 ADPRMQ3LIE5 342 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TOR1AIP1Q5JTV8 583 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 PAQR9Q6ZVX9 377 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 RPLP0P6Q8NHW5 317 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SETD7Q8WTS6 366 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 HRASLS5Q96KN8 279 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 OR4K3Q96R72 315 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 CD180Q99467 661 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 DOK1Q99704 481 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 BEX2Q9BXY8 128 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 CLCA3PQ9Y6N3 262 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 FLRT2O43155 660 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 GPR37L1O60883 481 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SLC25A12O75746 678 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 LDOC1O95751 146 aaPredicted RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 LAMP1P11279 417 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 DDX6P26196 483 aaKnown RBP eCLIP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TNFSF8P32971 234 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SEC23BQ15437 767 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 AMZ2Q86W34 360 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SAMD12Q8N8I0 201 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 FANK1Q8TC84 345 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 GPR151Q8TDV0 419 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 SECISBP2Q96T21 854 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 MKRN2Q9H000 416 aaKnown RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 OR51B5Q9H339 312 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 MKKSQ9NPJ1 570 aaPredicted RBP8.4□□□□□ -1.06
PCDH9-202ENST00000377865 IKZF2Q9UKS7 526 aa8.4□□□□□ -1.06
PCDH9-202ENST00000377865 TRAV6A0A075B6T7 132 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 METTL21EPA6NDL7 271 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 COCHO43405 550 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 S100A6P06703 90 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 SLC35G6P0C7Q6 338 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 ARSAP15289 507 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 DNASE1P24855 282 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 CLK3P49761 638 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 RPL6Q02878 288 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 SLC3A1Q07837 685 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 BCL7AQ4VC05 210 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF613Q6PF04 617 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 RNF111Q6ZNA4 994 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 FAM109AQ8N4B1 249 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 POMGNT2Q8NAT1 580 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 SMPDL3AQ92484 453 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 MMP28Q9H239 520 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 NT5DC2Q9H857 520 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 TMLHEQ9NVH6 421 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 OSER1Q9NX31 292 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 MRPS33Q9Y291 106 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 TEX51A0A1B0GUA7 166 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 OR7A17O14581 309 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 EEF1E1O43324 174 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 B3GALT2O43825 422 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 APOL3O95236 402 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 C1QAP02745 245 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 ADORA3P0DMS8 318 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 PCDH1Q08174 1060 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF267Q14586 743 aaPredicted RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 GPR19Q15760 415 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 NTRK2Q16620 822 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 KDM4DQ6B0I6 523 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 RGMBQ6NW40 437 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 TBPL2Q6SJ96 375 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 COMMD2Q86X83 199 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 ADGRG2Q8IZP9 1017 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 SPAG16Q8N0X2 631 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 COX18Q8N8Q8 333 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 OR2T33Q8NG76 320 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 S100A16Q96FQ6 103 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 LRR1Q96L50 414 aa8.4□□□□□ -1.07
PCDH9-202ENST00000377865 NUFIP1Q9UHK0 495 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.4□□□□□ -1.07
PCDH9-202ENST00000377865 MN1Q10571 1320 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms