RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 KLHL1Q9NR64 748 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 VTI1BQ9UEU0 232 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 SLC25A12O75746 678 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 NEURL1O76050 574 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 MLYCDO95822 493 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 TNFRSF8P28908 595 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 TRHRP34981 398 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 BIKQ13323 160 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 MILR1Q7Z6M3 343 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 MORN4Q8NDC4 146 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF483Q8TF39 744 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 THAP3Q8WTV1 239 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 TANKQ92844 425 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 TMEM125Q96AQ2 219 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 PSMG3-AS1Q96PY0 264 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF717Q9BY31 904 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 EPB41L4BQ9H329 900 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 ELOVL6Q9H5J4 265 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 RPF2Q9H7B2 306 aaKnown RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 TRIM45Q9H8W5 580 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 PPCSQ9HAB8 311 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 ZBTB26Q9HCK0 441 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 COPS7AQ9UBW8 275 aa15.68■□□□□ 0.1
HMGN4-201ENST00000377575 ERRFI1Q9UJM3 462 aaPredicted RBP15.68■□□□□ 0.1
HMGN4-201ENST00000377575 A0A0A6YYD5 115 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 C17orf105B2RV13 164 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 DYRK3O43781 588 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ZFAND5O76080 213 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 SP1P08047 785 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 GSTA1P08263 222 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 SBK3P0C264 359 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 NR2F6P10588 404 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 GP1BBP13224 206 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 TNNI3P19429 210 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ST13P50502 369 aaKnown RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 HLCSP50747 726 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 GPR143P51810 404 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 NEK2P51955 445 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 HNRNPH2P55795 449 aaKnown RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 HERVK_113P63132 956 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 PLIN5Q00G26 463 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 PMP22Q01453 160 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ID2Q02363 134 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 C4orf17Q53FE4 359 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 SLC25A25Q6KCM7 469 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 GFRALQ6UXV0 394 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 HSDL2Q6YN16 418 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 TMEM156Q8N614 296 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 OR4F6Q8NGB9 312 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 UBLCP1Q8WVY7 318 aaPredicted RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ANKRD9Q96BM1 317 aaPredicted RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 DGAT2Q96PD7 388 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ERVK-6Q9BXR3 956 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 HES7Q9BYE0 225 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 OR8D2Q9GZM6 311 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 DDX31Q9H8H2 851 aaKnown RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 WDR41Q9HAD4 459 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 AHSPQ9NZD4 102 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 TMEM216Q9P0N5 145 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 TBK1Q9UHD2 729 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF223Q9UK11 482 aaPredicted RBP15.67■□□□□ 0.1
HMGN4-201ENST00000377575 OSGIN2Q9Y236 505 aa15.67■□□□□ 0.1
HMGN4-201ENST00000377575 ASPDHA6ND91 283 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 FGF17O60258 216 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 NME2P1O60361 137 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 EEDO75530 441 aaKnown RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 ITGA10O75578 1167 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 ETHE1O95571 254 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 FAM58BPP0C7Q3 252 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 NME2P22392 152 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 BSGP35613 385 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 STT3AP46977 705 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 SSR4P51571 173 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 PER3P56645 1201 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 IGLV3-21P80748 117 aaPredicted RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 MAPKAPK3Q16644 382 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF468Q5VIY5 522 aaPredicted RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 MRM1Q6IN84 353 aaKnown RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 PAGE2Q7Z2X7 111 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 GALNTL5Q7Z4T8 443 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 SLC22A9Q8IVM8 553 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 TMEM151AQ8N4L1 468 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 MYRIPQ8NFW9 859 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 SLC2A12Q8TD20 617 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 PTPMT1Q8WUK0 201 aaPredicted RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 MTFMTQ96DP5 389 aaKnown RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 PELOQ9BRX2 385 aaKnown RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 SEC14L3Q9UDX4 400 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 TRPS1Q9UHF7 1281 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 SNX6Q9UNH7 406 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 KLF13Q9Y2Y9 288 aaPredicted RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 YARS2Q9Y2Z4 477 aaKnown RBP15.66■□□□□ 0.1
HMGN4-201ENST00000377575 ATG4BQ9Y4P1 393 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 ICE1Q9Y2F5 2266 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 DOPEY1Q5JWR5 2465 aa15.66■□□□□ 0.1
HMGN4-201ENST00000377575 MYOCOSA0A1B0GUC4 107 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 ARHGAP10A1A4S6 786 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 GOLGA8RI6L899 631 aa15.65■□□□□ 0.1
HMGN4-201ENST00000377575 PROM1O43490 865 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms