RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RACGAP1Q9H0H5 632 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 TMEM38AQ9H6F2 299 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ATP13A2Q9NQ11 1180 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 TIA1P31483 386 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 OPRD1P41143 372 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF628Q5EBL2 1059 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 HSDL2Q6YN16 418 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 OTOP2Q7RTS6 562 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 PDZD3Q86UT5 571 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 KATNB1Q9BVA0 655 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 COMMD3Q9UBI1 195 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 HCSTQ9UBK5 93 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 SPIN1Q9Y657 262 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ARRDC5A6NEK1 342 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 PDE9AO76083 593 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 MPC1LP0DKB6 136 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 SLC2A2P11168 524 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ETV5P41161 510 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ETV1P50549 477 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 PCBP3P57721 371 aaKnown RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 P2RY14Q15391 338 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 MPEG1Q2M385 716 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ATAT1Q5SQI0 421 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 IQCF1Q8N6M8 205 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 HUS1BQ8NHY5 278 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 UPRTQ96BW1 309 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 ALG14Q96F25 216 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 MAGEB10Q96LZ2 347 aaPredicted RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 COQ7Q99807 217 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 WRAP53Q9BUR4 548 aaKnown RBP15.74■□□□□ 0.11
TRIM39-201ENST00000376656 MCUBQ9NWR8 336 aa15.74■□□□□ 0.11
TRIM39-201ENST00000376656 UGDHO60701 494 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 NOS1APO75052 506 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 CHI3L1P36222 383 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 AP1S2P56377 157 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 RPS13P62277 151 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 RPS25P62851 125 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ILKQ13418 452 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 NAE1Q13564 534 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 TRIQKQ629K1 86 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 C12orf73Q69YU5 71 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 GRHL2Q6ISB3 625 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 CASP12Q6UXS9 341 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 C19orf18Q8NEA5 215 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 GOT1L1Q8NHS2 421 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 LINC01599Q8WXQ3 324 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 OR4K3Q96R72 315 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 BHLHE41Q9C0J9 482 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ANKRA2Q9H9E1 313 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 B3GAT2Q9NPZ5 323 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 RBFOX1Q9NWB1 397 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 MAT2BQ9NZL9 334 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 H0YIV9 168 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ADAP00813 363 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 XKP51811 444 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 RPS26P11Q5JNZ5 115 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 DDX53Q86TM3 631 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 AMIGO1Q86WK6 493 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 Q8N402 240 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 OXR1Q8N573 874 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 SPERTQ8NA61 448 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 OR7G3Q8NG95 312 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 OR52P1PQ8NH57 321 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 KIAA1143Q96AT1 154 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ASIC4Q96FT7 647 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 GFM1Q96RP9 751 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 TRIM45Q9H8W5 580 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 SLC23A1Q9UHI7 598 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 KCND3Q9UK17 655 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 PCDHB7Q9Y5E2 793 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 IFNA14P01570 189 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 FAM157BP0CG42 384 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF33BQ06732 778 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF630Q2M218 657 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 CCSMST1Q4G0I0 132 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 MPPE1Q53F39 396 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 TRIM40Q6P9F5 258 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 PRSS55Q6UWB4 352 aaPredicted RBP15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ZNF767PQ75MW2 155 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 NATD1Q8N6N6 113 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 OR52I1Q8NGK6 324 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 C1GALT1C1Q96EU7 318 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 KCTD7Q96MP8 289 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 NDOR1Q9UHB4 597 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 ATP6V1HQ9UI12 483 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 CD84Q9UIB8 345 aa15.73■□□□□ 0.11
TRIM39-201ENST00000376656 LEUTXA8MZ59 168 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 ADAM12O43184 909 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 OR10H3O60404 316 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 SEMA7AO75326 666 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 APOL3O95236 402 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 CPEP16870 476 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 SOAT1P35610 550 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 GSTM5P46439 218 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 SP140Q13342 867 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 PRSS53Q2L4Q9 553 aa15.72■□□□□ 0.11
TRIM39-201ENST00000376656 WSCD2Q2TBF2 565 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms