RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FBRSQ9HAH7 460 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 Q9N2J8 555 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 MAN2C1Q9NTJ4 1040 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.2
TRAF1-201ENST00000373887 C6orf47O95873 294 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 AHSGP02765 367 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 LUMP51884 338 aaPredicted RBP13.77□□□□□ -0.2
TRAF1-201ENST00000373887 RUNX3Q13761 415 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 MAMDC4Q6UXC1 1216 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 CPNE2Q96FN4 548 aaPredicted RBP13.77□□□□□ -0.2
TRAF1-201ENST00000373887 ZDHHC2Q9UIJ5 367 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 RNF11Q9Y3C5 154 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 A6NCN8 305 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 FAM227AF5H4B4 570 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 H7BY64 318 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 C8BP07358 591 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 FOXN2P32314 431 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 MORN1Q5T089 497 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 PDSS1Q5T2R2 415 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 ASB9Q96DX5 294 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 PRAP1Q96NZ9 151 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 FN3KQ9H479 309 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 ST3GAL3Q11203 375 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.21
TRAF1-201ENST00000373887 CLCA1A8K7I4 914 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 BRINP1O60477 761 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF35P13682 527 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 SLC9A3P48764 834 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 GPR157Q5UAW9 335 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 POC1BQ8TC44 478 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 FAM3CQ92520 227 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 NSMAFQ92636 917 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 TMEM184CQ9NVA4 438 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 REV1Q9UBZ9 1251 aa13.77□□□□□ -0.21
TRAF1-201ENST00000373887 H7C417 338 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 AGR2O95994 175 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 OR1E2P47887 323 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 GLIS1Q8NBF1 620 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TMIEQ8NEW7 156 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 C17orf62Q9BQA9 187 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 RANBP3Q9H6Z4 567 aaPredicted RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 MS4A12Q9NXJ0 267 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 AGAP5A6NIR3 686 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 LRRN3E7EW58 273 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 KRBOX4Q5JUW0 171 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 GPR139Q6DWJ6 353 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 HHIPQ96QV1 700 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 PHB2Q99623 299 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 LRRN3Q9H3W5 708 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 MRPL15Q9P015 296 aaKnown RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SLCO3A1Q9UIG8 710 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 ATXN7L1Q9ULK2 861 aaPredicted RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 LRP6O75581 1613 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 AQP12BA6NM10 295 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 H0YJX3 145 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 M0QX08 132 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 EEF1E1O43324 174 aaKnown RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TOXO94900 526 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 PIM1P11309 404 aaPredicted RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 CTHP32929 405 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 NIPAL4Q0D2K0 466 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SNTA1Q13424 505 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 GNMTQ14749 295 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 BATFQ16520 125 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 PTCHD3Q3KNS1 767 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 FRG2Q64ET8 278 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 RNF130Q86XS8 419 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 AQP12AQ8IXF9 295 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 OR4F6Q8NGB9 312 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 FRG2BQ96QU4 278 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 NPY6RQ99463 290 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TAS2R1Q9NYW7 299 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 A8MT66 165 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 GARNL3Q5VVW2 1013 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF852Q6ZMS4 543 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 CMASQ8NFW8 434 aaPredicted RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 UBQLN2Q9UHD9 624 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 HNRNPA1P09651 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 TTLL10Q6ZVT0 673 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 HMGN2P46Q86SG4 172 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SHISA4Q96DD7 197 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 ZNF717Q9BY31 904 aaPredicted RBP13.76□□□□□ -0.21
TRAF1-201ENST00000373887 NELFAQ9H3P2 528 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
TRAF1-201ENST00000373887 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms