RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 NRBF2Q96F24 287 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 GLIPR2Q9H4G4 154 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 REEP1Q9H902 201 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 SLC35C2Q9NQQ7 365 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 TUBA8Q9NY65 449 aaPredicted RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 WSB2Q9NYS7 404 aaPredicted RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 THEGQ9P2T0 379 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 TMEM265A0A087WTH1 108 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 VILLO15195 856 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 UGT2B7P16662 529 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 IGFBP5P24593 272 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 ELK4P28324 431 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 DAPP51397 102 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 RPS15AP62244 130 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 SPDYE7PQ495Y7 208 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 IFI44LQ53G44 452 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 ZNF542PQ5EBM4 170 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 ZC3H12BQ5HYM0 836 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 THAP5Q7Z6K1 395 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 TRIM48Q8IWZ4 208 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 C8orf59Q8N0T1 100 aaPredicted RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 SRFBP1Q8NEF9 429 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 AMDHD1Q96NU7 426 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 YTHDF1Q9BYJ9 559 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 NDUFAF4Q9P032 175 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 PDP1Q9P0J1 537 aaPredicted RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 DMTF1Q9Y222 760 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 PCDHGA2Q9Y5H1 932 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 OR2A25A4D2G3 310 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 CELA2BP08218 269 aaPredicted RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 MAGP20916 626 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 POLR2IP36954 125 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 STXBP1P61764 594 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 LRIT3Q3SXY7 679 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 KDM4DQ6B0I6 523 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 SFTPA2Q8IWL1 248 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 SLC30A8Q8IWU4 369 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 LZICQ8WZA0 190 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 DGCR14Q96DF8 476 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 A4GALTQ9NPC4 353 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 THUMPD1Q9NXG2 353 aaKnown RBP18.56■□□□□ 0.56
HDAC1-201ENST00000373548 FBXW2Q9UKT8 454 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 PCDHGA8Q9Y5G5 932 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 ORC6Q9Y5N6 252 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 SCN3AQ9NY46 2000 aa18.56■□□□□ 0.56
HDAC1-201ENST00000373548 CCDC88CQ9P219 2028 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 LOC100130705A0A1B0GUX0 176 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 OR6C74A6NCV1 312 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 PRAMEF25A6NGN4 478 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 PGRMC2O15173 223 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 AIFM1O95831 613 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 POLR2CP19387 275 aaPredicted RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 TSFMP43897 325 aaKnown RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 YAP1P46937 504 aaKnown RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 FZD2Q14332 565 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 REEP3Q6NUK4 255 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 FBXO42Q6P3S6 717 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GALNT5Q7Z7M9 940 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 OR10G6Q8NH81 332 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GPR27Q9NS67 375 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 SLCO1B1Q9Y6L6 691 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 TDRD6O60522 2096 aaKnown RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 SPTY2D1-AS1A0A0U1RR47 76 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 CHURC1-FNTBB4DL54 471 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 TNFSF14O43557 240 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GUCY1B2O75343 617 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 VIPP01282 170 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 C9P02748 559 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 THEGLP0DJG4 465 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 CD6P30203 668 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 OR1E2P47887 323 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GAS6Q14393 721 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 C18orf63Q68DL7 685 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 DGLUCYQ7Z3D6 616 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 ASPGQ86U10 573 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 PIK3C3Q8NEB9 887 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 SLC38A5Q8WUX1 472 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 RAB8BQ92930 207 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 TMIGD2Q96BF3 282 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GAS2L1Q99501 681 aaPredicted RBP18.55■□□□□ 0.56
HDAC1-201ENST00000373548 EPYCQ99645 322 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GSDMCQ9BYG8 508 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 ING2Q9H160 280 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 SERHL2Q9H4I8 314 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 RUBCNLQ9H714 662 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 LMAN1LQ9HAT1 526 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 ACTR10Q9NZ32 417 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 CPNE7Q9UBL6 633 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 CA14Q9ULX7 337 aa18.55■□□□□ 0.56
HDAC1-201ENST00000373548 GSAPA4D1B5 854 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 SLC16A6O15403 523 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 CTSVO60911 334 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 IFNA14P01570 189 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 ITGAMP11215 1152 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 RRM2P31350 389 aa18.54■□□□□ 0.56
HDAC1-201ENST00000373548 SNRPNP63162 240 aaKnown RBP18.54■□□□□ 0.56
HDAC1-201ENST00000373548 TP53BP2Q13625 1128 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms