RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 CRTC1Q6UUV9 634 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 PRSS48Q7RTY5 328 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 LRRC70Q7Z2Q7 622 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 FCGR1BQ92637 280 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 TMEM80Q96HE8 168 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 SLC45A1Q9Y2W3 748 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 H0YC42 278 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 SLC16A8O95907 504 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 NKX3-2P78367 333 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 TEAD4Q15561 434 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 LEXMQ3ZCV2 418 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 FLYWCH1Q4VC44 716 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.59□□□□□ -0.55
NCDN-202ENST00000373243 ADNP2Q6IQ32 1131 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 C8orf82Q6P1X6 216 aaPredicted RBP11.59□□□□□ -0.55
NCDN-202ENST00000373243 CORO6Q6QEF8 472 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 USP51Q70EK9 711 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 KIF18BQ86Y91 864 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 GHDCQ8N2G8 530 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 ZFP41Q8N8Y5 198 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 DCAF4L2Q8NA75 395 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
NCDN-202ENST00000373243 OR2AG1Q9H205 316 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 PPT2Q9UMR5 302 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 CORO2BQ9UQ03 480 aa11.59□□□□□ -0.55
NCDN-202ENST00000373243 FAM240BA0A1B0GVZ2 78 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 INPPL1O15357 1258 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 CCL16O15467 120 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 NR2F6P10588 404 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 MYL9P24844 172 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 MPPE1Q53F39 396 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 CEACAM20Q6UY09 585 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 ZSWIM9Q86XI8 627 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 CHST14Q8NCH0 376 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 TTC9Q92623 222 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 REPS1Q96D71 796 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 RADILQ96JH8 1075 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 IL17FQ96PD4 163 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 SLC30A2Q9BRI3 323 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 DOHHQ9BU89 302 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 ZDHHC4Q9NPG8 344 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.55
NCDN-202ENST00000373243 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.55
NCDN-202ENST00000373243 TRAV19A0A0A6YYK7 116 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 UPK1AO00322 258 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 ATG13O75143 517 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 NME6O75414 186 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 WBP4O75554 376 aaKnown RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 PCDH8O95206 1070 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 POP4O95707 220 aaKnown RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 HTR1AP08908 422 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 SSTR4P31391 388 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CNR2P34972 360 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 SOX3P41225 446 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 ZNF45Q02386 682 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 COX10Q12887 443 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 QPRTQ15274 297 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 DDI2Q5TDH0 399 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 LILRA3Q8N6C8 439 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 HUS1BQ8NHY5 278 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 ZNF461Q8TAF7 563 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CIDECQ96AQ7 238 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 TMCO6Q96DC7 493 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 RNFT2Q96EX2 444 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 GHITMQ9H3K2 345 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 AHSPQ9NZD4 102 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CEP290O15078 2479 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 GLOD5A6NK44 160 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 ZNF98A6NK75 572 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 SSX5O60225 188 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 RYKP34925 604 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 FKBP1BP68106 108 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 TMEM65Q6PI78 240 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CD300LGQ6UXG3 332 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CCDC149Q6ZUS6 474 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 CELF5Q8N6W0 485 aaKnown RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 ZNF558Q96NG5 402 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 WACQ9BTA9 647 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 MAGIXQ9H6Y5 334 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 TRIM45Q9H8W5 580 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 ING3Q9NXR8 418 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 ZNF282Q9UDV7 671 aaPredicted RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 ENOPH1Q9UHY7 261 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 RIMKLBQ9ULI2 386 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 DIMT1Q9UNQ2 313 aaKnown RBP11.58□□□□□ -0.56
NCDN-202ENST00000373243 BAIAP2Q9UQB8 552 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 POFUT2Q9Y2G5 429 aa11.58□□□□□ -0.56
NCDN-202ENST00000373243 GABRR3A8MPY1 467 aa11.57□□□□□ -0.56
NCDN-202ENST00000373243 PRSS23O95084 383 aa11.57□□□□□ -0.56
NCDN-202ENST00000373243 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
NCDN-202ENST00000373243 CHST9Q7L1S5 443 aa11.57□□□□□ -0.56
NCDN-202ENST00000373243 KRT74Q7RTS7 529 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms