RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 SLC35C2Q9NQQ7 365 aa23.7■■□□□ 1.38
CTSA-203ENST00000372459 USE1Q9NZ43 259 aa23.7■■□□□ 1.38
CTSA-203ENST00000372459 ABCG2Q9UNQ0 655 aa23.7■■□□□ 1.38
CTSA-203ENST00000372459 SLCO1B1Q9Y6L6 691 aa23.7■■□□□ 1.38
CTSA-203ENST00000372459 H0YAE9 185 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 GCM2O75603 506 aaPredicted RBP23.69■■□□□ 1.38
CTSA-203ENST00000372459 GNAO1P09471 354 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 SLC35G6P0C7Q6 338 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 THRBP10828 461 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 CERS1P27544 350 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 DSTNP60981 165 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 EEF1A2Q05639 463 aaKnown RBP23.69■■□□□ 1.38
CTSA-203ENST00000372459 SPDYE7PQ495Y7 208 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 FIGLAQ6QHK4 219 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 CCDC80Q76M96 950 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 PSMA8Q8TAA3 256 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 DTNBP1Q96EV8 351 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 NELL2Q99435 816 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 DOHHQ9BU89 302 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 OSBPL10Q9BXB5 764 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 SIRT3Q9NTG7 399 aaPredicted RBP23.69■■□□□ 1.38
CTSA-203ENST00000372459 THEGQ9P2T0 379 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 H6PDO95479 791 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 ARAFP10398 606 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 NTSP30990 170 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 SELENOWP63302 87 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 VLDLRP98155 873 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 C1orf61Q13536 156 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 PIWIL3Q7Z3Z3 882 aaKnown RBP23.69■■□□□ 1.38
CTSA-203ENST00000372459 IFT80Q9P2H3 777 aaPredicted RBP23.69■■□□□ 1.38
CTSA-203ENST00000372459 FBXW2Q9UKT8 454 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 ANGPT4Q9Y264 503 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 ATG4BQ9Y4P1 393 aa23.69■■□□□ 1.38
CTSA-203ENST00000372459 MYOCOSA0A1B0GUC4 107 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 A0A1W2PR48 441 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 METTL12A8MUP2 240 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 hCG_2039718K7EN88 272 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 FOSL2P15408 326 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 JUNDP17535 347 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 CD27P26842 260 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 CDK9P50750 372 aaKnown RBP23.68■■□□□ 1.38
CTSA-203ENST00000372459 PPP2R2BQ00005 443 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 EPS8Q12929 822 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 PUS10Q3MIT2 529 aaKnown RBP23.68■■□□□ 1.38
CTSA-203ENST00000372459 FCRL6Q6DN72 434 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 TMEM179BQ7Z7N9 219 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 ZC3H7AQ8IWR0 971 aaKnown RBP23.68■■□□□ 1.38
CTSA-203ENST00000372459 KCT2Q8NC54 265 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 TSPAN14Q8NG11 270 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 ZFP28Q8NHY6 868 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 THAP11Q96EK4 314 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 OR2A5Q96R48 311 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 LYARQ9NX58 379 aaKnown RBP23.68■■□□□ 1.38
CTSA-203ENST00000372459 MYRFQ9Y2G1 1151 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 SNX11Q9Y5W9 270 aa23.68■■□□□ 1.38
CTSA-203ENST00000372459 ARHGDIAP52565 204 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 BTN3A2P78410 334 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 KCNJ10P78508 379 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 ADARB1P78563 741 aaKnown RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 SHQ1Q6PI26 577 aaKnown RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 CEACAM20Q6UY09 585 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 RBM12BQ8IXT5 1001 aaKnown RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 HS3ST5Q8IZT8 346 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 TM4SF19Q96DZ7 209 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 FBXL20Q96IG2 436 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 AMDHD1Q96NU7 426 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 GLIPR2Q9H4G4 154 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 SMURF2Q9HAU4 748 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 ZSCAN32Q9NX65 697 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 KLK4Q9Y5K2 254 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 U3KQV3 271 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 H3BNH8 94 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 IFNA14P01570 189 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 PXNP49023 591 aaPredicted RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 PPP1R8Q12972 351 aaKnown RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 C6orf120Q7Z4R8 191 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 SFTPA2Q8IWL1 248 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 GJD3Q8N144 294 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 FAM46DQ8NEK8 389 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 ZDHHC1Q8WTX9 485 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 LZICQ8WZA0 190 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 RMND5BQ96G75 393 aaPredicted RBP23.67■■□□□ 1.38
CTSA-203ENST00000372459 MPP4Q96JB8 637 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 BBS4Q96RK4 519 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 LRRC61Q9BV99 259 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 PCED1AQ9H1Q7 454 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 HRASLS2Q9NWW9 162 aa23.67■■□□□ 1.38
CTSA-203ENST00000372459 A0A0J9YVX5 310 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 URADA6NGE7 173 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 GLOD5A6NK44 160 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 CTSVO60911 334 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 PRKRAO75569 313 aaKnown RBP23.66■■□□□ 1.38
CTSA-203ENST00000372459 AIFM1O95831 613 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 GPC1P35052 558 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 RXRGP48443 463 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 CCT3P49368 545 aaKnown RBP23.66■■□□□ 1.38
CTSA-203ENST00000372459 NCBP2P52298 156 aaKnown RBP eCLIP23.66■■□□□ 1.38
CTSA-203ENST00000372459 HHEXQ03014 270 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 RELAQ04206 551 aa23.66■■□□□ 1.38
CTSA-203ENST00000372459 ZIK1Q3SY52 487 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms