RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CRB3Q9BUF7 120 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 NPAP1Q9NZP6 1156 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 PCDHB11Q9Y5F2 797 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ZNF638Q14966 1978 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MATN3O15232 486 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 PIP5K1CO60331 668 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 TLR5O60602 858 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MT-CYBP00156 380 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 NPRL3Q12980 569 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 RAB35Q15286 201 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ZSCAN4Q8NAM6 433 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 TRMT61BQ9BVS5 477 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MRPL17Q9NRX2 175 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 COPS3Q9UNS2 423 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ESCO2Q56NI9 601 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SFRP4Q6FHJ7 346 aaPredicted RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 CNIH2Q6PI25 160 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 ZC3H14Q6PJT7 736 aaKnown RBP14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SEMA6DQ8NFY4 1073 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 OR56A1Q8NGH5 318 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 JOSD2Q8TAC2 188 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 PNPLA2Q96AD5 504 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 MROQ9BYG7 248 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 SLC6A5Q9Y345 797 aa14.71□□□□□ -0.05
COL5A1-201ENST00000371817 A0A096LPI6 279 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 BPIP17213 487 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 SERINC3Q13530 473 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 TSPAN11A1L157 253 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 SOX2P48431 317 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 PCGF3Q3KNV8 242 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 C10orf62Q5T681 223 aaPredicted RBP14.71□□□□□ -0.06
COL5A1-201ENST00000371817 ZDHHC24Q6UX98 284 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 TRIM46Q7Z4K8 759 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 CCDC71LQ8N9Z2 235 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 SLCO2A1Q92959 643 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 CNTNAP3Q9BZ76 1288 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 DZANK1Q9NVP4 752 aa14.71□□□□□ -0.06
COL5A1-201ENST00000371817 TMEM233B4DJY2 109 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ELOAQ14241 798 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SLC35F1Q5T1Q4 408 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 KIAA0930Q6ICG6 404 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ABHD13Q7L211 337 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 OR8J3Q8NGG0 315 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 DEFB129Q9H1M3 183 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ASAH2Q9NR71 780 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 RLIMQ9NVW2 624 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 OXTRP30559 389 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 GMPRP36959 345 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TSPYL5Q86VY4 417 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 NTAN1Q96AB6 310 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 KREMEN1Q96MU8 473 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TMEM181Q9P2C4 612 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 PPP1R2P9O14990 202 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ASGR1P07306 291 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF33BQ06732 778 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 NUDT13Q86X67 352 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ALDH16A1Q8IZ83 802 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ZCCHC10Q8TBK6 192 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SLAMF9Q96A28 289 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 RNF32Q9H0A6 362 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 RANGRFQ9HD47 186 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 PHPT1Q9NRX4 125 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 HEXBP07686 556 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 CAV2P51636 162 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 ESPL1Q14674 2120 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 GPR19Q15760 415 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 NAT8LQ8N9F0 302 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 CCDC74AQ96AQ1 378 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 C10orf90Q96M02 699 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SEZ6LQ9BYH1 1024 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 TTTY10Q9BZA0 68 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 USP32Q8NFA0 1604 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 M0R2N6 131 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 INSIG1O15503 277 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 MBLAC2Q68D91 279 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SSX7Q7RTT5 188 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 PELOQ9BRX2 385 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 MCCC2Q9HCC0 563 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 KIAA1210Q9ULL0 1709 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 POM121CA8CG34 1229 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 EIF2DP41214 584 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 HK3P52790 923 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 UBE2KP61086 200 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 LRRC52Q8N7C0 313 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 HS6ST2Q96MM7 605 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 HDHD5Q9BXW7 423 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 MRPS30Q9NP92 439 aaKnown RBP14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SMCO4Q9NRQ5 59 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 SCN2AQ99250 2005 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 EPOP01588 193 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 STSP08842 583 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 PBX3P40426 434 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 HMGCS1Q01581 520 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 OR4F3Q6IEY1 312 aa14.7□□□□□ -0.06
COL5A1-201ENST00000371817 NANOGP8Q6NSW7 305 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms