RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 OR4A15Q8NGL6 344 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.45
GPC3-201ENST00000370818 SMPDL3AQ92484 453 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 CIDECQ96AQ7 238 aaPredicted RBP12.21□□□□□ -0.45
GPC3-201ENST00000370818 C12orf66Q96MD2 445 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 GDF15Q99988 308 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 ZNF717Q9BY31 904 aaPredicted RBP12.21□□□□□ -0.45
GPC3-201ENST00000370818 BTBD1Q9H0C5 482 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 RHBGQ9H310 441 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 OSGEPL1Q9H4B0 414 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 RABL2AQ9UBK7 228 aaPredicted RBP12.21□□□□□ -0.45
GPC3-201ENST00000370818 ZNF221Q9UK13 617 aa12.21□□□□□ -0.45
GPC3-201ENST00000370818 SAMD4AQ9UPU9 718 aaKnown RBP12.21□□□□□ -0.45
GPC3-201ENST00000370818 PLPP1O14494 284 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 TPPPO94811 219 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 DNTTP04053 509 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 MAGP20916 626 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 ACVR2AP27037 513 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 GRK3P35626 688 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 MVDP53602 400 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 PPP2R2BQ00005 443 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 C2orf80Q0P641 193 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 CLCA4Q14CN2 919 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 RGNQ15493 299 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 ATAD3CQ5T2N8 411 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 AGAP6Q5VW22 663 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 ANKRD34AQ69YU3 496 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 ERICH5Q6P6B1 374 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.46
GPC3-201ENST00000370818 ZNF852Q6ZMS4 543 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 MTSS1LQ765P7 747 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 CCDC103Q8IW40 242 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 MMP21Q8N119 569 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 POP5Q969H6 163 aaKnown RBP12.21□□□□□ -0.46
GPC3-201ENST00000370818 AGAP4Q96P64 663 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 TMEM246Q9BRR3 403 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 TIMM29Q9BSF4 260 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 MIR1-1HGQ9H1L0 117 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 PELI2Q9HAT8 420 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 SMURF2Q9HAU4 748 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 LTB4R2Q9NPC1 389 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 NAALAD2Q9Y3Q0 740 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 SNX5Q9Y5X3 404 aa12.21□□□□□ -0.46
GPC3-201ENST00000370818 TICRRQ7Z2Z1 1910 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 FEZF1A0PJY2 475 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ANHXE9PGG2 379 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 H7BY64 318 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ZNF682O95780 498 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PTTG1O95997 202 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 SEMG1P04279 462 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 THRBP10828 461 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 HOXB2P14652 356 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 AGXTP21549 392 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 CRYBA2P53672 197 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PPP2CBP62714 309 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PPP2CAP67775 309 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 EMX1Q04741 257 aaPredicted RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 CTU2Q2VPK5 515 aaKnown RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 HORMAD1Q86X24 394 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 FAR1Q8WVX9 515 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 MAL2Q969L2 176 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PRAP1Q96NZ9 151 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 FERD3LQ96RJ6 166 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 NODALQ96S42 347 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 MYOCQ99972 504 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 EPS8L2Q9H6S3 715 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 CLDND1Q9NY35 253 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 VNN3Q9NY84 501 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ZNF282Q9UDV7 671 aaPredicted RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 PTGES3LE9PB15 166 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 GNGT2O14610 69 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 C6orf47O95873 294 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 HPRP00739 348 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 IL3P08700 152 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 DCTP40126 519 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 CCR8P51685 355 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 NCS1P62166 190 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 CYP4F2P78329 520 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 LRRC74AQ0VAA2 488 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 VEZF1Q14119 521 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 NPTX1Q15818 432 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 KHDRBS2Q5VWX1 349 aaKnown RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 GDPD3Q7L5L3 318 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 VTCN1Q7Z7D3 282 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ADHFE1Q8IWW8 467 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 NAGSQ8N159 534 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 SVOPLQ8N434 492 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 SVOPQ8N4V2 548 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 LSMEM1Q8N8F7 131 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 ZNF300Q96RE9 604 aaPredicted RBP12.2□□□□□ -0.46
GPC3-201ENST00000370818 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 APOOQ9BUR5 198 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 PCBD2Q9H0N5 130 aa12.2□□□□□ -0.46
GPC3-201ENST00000370818 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms