RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 DCP2Q8IU60 420 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 MSRB3Q8IXL7 192 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 OR56A3Q8NH54 315 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 OR10G6Q8NH81 332 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 EPHX3Q9H6B9 360 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 KLF15Q9UIH9 416 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 CELSR3Q9NYQ7 3312 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 EIF2S1P05198 315 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 HTR1AP08908 422 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 PTGER1P34995 402 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 MC1RQ01726 317 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 RUNDC3AQ59EK9 446 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 COLEC12Q5KU26 742 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SLCO4C1Q6ZQN7 724 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 USP51Q70EK9 711 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 DCUN1D3Q8IWE4 304 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 TMEM145Q8NBT3 493 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 DNASE1L2Q92874 299 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 RPL3LQ92901 407 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 MED30Q96HR3 178 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 RBM4BQ9BQ04 359 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 RBM4Q9BWF3 364 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 DPEP2Q9H4A9 486 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SPHK1Q9NYA1 384 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 GPRC5BQ9NZH0 403 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 C5AR2Q9P296 337 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 ASXL3Q9C0F0 2248 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 PIPSLA2A3N6 862 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 LRRC72A6NJI9 287 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 hCG_2039718K7EN88 272 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 ARHGAP33O14559 1287 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 PRAMEF10O60809 474 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 MITFO75030 526 aaPredicted RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 IFI30P13284 250 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 HNRNPA2B1P22626 353 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 ACSM2AQ08AH3 577 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 KIAA0040Q15053 153 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 STEAP3Q658P3 488 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 ACSM2BQ68CK6 577 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SYT12Q8IV01 421 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 C10orf111Q8N326 155 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 OR5K2Q8NHB8 316 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 WDR48Q8TAF3 677 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 SLC5A11Q8WWX8 675 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 TXNDC15Q96J42 360 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 LINC00615Q96LM1 132 aaPredicted RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 PANX1Q96RD7 426 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 C1QTNF7Q9BXJ2 289 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 YTHDF1Q9BYJ9 559 aaKnown RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 AMBRA1Q9C0C7 1298 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 CLMPQ9H6B4 373 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 GORASP2Q9H8Y8 452 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 POLMQ9NP87 494 aaPredicted RBP10.16□□□□□ -0.78
TPM3-212ENST00000368533 ZNF639Q9UID6 485 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 C3orf18Q9UK00 162 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 PPT2Q9UMR5 302 aa10.16□□□□□ -0.78
TPM3-212ENST00000368533 C17orf113A0A1B0GUU1 675 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 XPNPEP2O43895 674 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 ALX3O95076 343 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 IDSP22304 550 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 CDKN2CP42773 168 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 CD47Q08722 323 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 C6orf141Q5SZD1 244 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 NOXRED1Q6NXP6 359 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 TMEM179BQ7Z7N9 219 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 ZDHHC21Q8IVQ6 265 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 SLC22A18ASQ8N1D0 253 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 L3MBTL4Q8NA19 623 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 OR52E1Q8NGJ3 308 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 SLC6A18Q96N87 628 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 DEPDC7Q96QD5 511 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 TMEM45AQ9NWC5 275 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 PAQR5Q9NXK6 330 aaPredicted RBP10.15□□□□□ -0.78
TPM3-212ENST00000368533 VPS29Q9UBQ0 182 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 VPS4AQ9UN37 437 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 PLXND1Q9Y4D7 1925 aa10.15□□□□□ -0.78
TPM3-212ENST00000368533 FANCMQ8IYD8 2048 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 LOC100130705A0A1B0GUX0 176 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 SCO2O43819 266 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 UGT2B11O75310 529 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 IGHV4-34P06331 123 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 CRHBPP24387 322 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 DCTP40126 519 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 MLLT3P42568 568 aaPredicted RBP10.15□□□□□ -0.79
TPM3-212ENST00000368533 GPLD1P80108 840 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 PPP2R2BQ00005 443 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 USP39Q53GS9 565 aaKnown RBP10.15□□□□□ -0.79
TPM3-212ENST00000368533 GPR153Q6NV75 609 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 MED27Q6P2C8 311 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 FAM129CQ86XR2 697 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 WDR20Q8TBZ3 569 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 TPD52L3Q96J77 140 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 OR2M4Q96R27 311 aa10.15□□□□□ -0.79
TPM3-212ENST00000368533 BEX2Q9BXY8 128 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms