RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PDPK1O15530 556 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 RPN2P04844 631 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ADH5P11766 374 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CNR2P34972 360 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 FRKP42685 505 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 MAPK12P53778 367 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 MEF2AQ02078 507 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 FPGSQ05932 587 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD48-201ENST00000368045 GANABQ14697 944 aaKnown RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 HEPACAMQ14CZ8 416 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TMEM52BQ4KMG9 183 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 DSG4Q86SJ6 1040 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 C17orf64Q86WR6 236 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 PARP16Q8N5Y8 322 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 POC5Q8NA72 575 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 IL17RCQ8NAC3 791 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ZNF740Q8NDX6 193 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 OR8D1Q8WZ84 308 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 HPS1Q92902 700 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TRNT1Q96Q11 434 aaKnown RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 AIF1LQ9BQI0 150 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CHCHD6Q9BRQ6 235 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TAPBPLQ9BX59 468 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 PCBD2Q9H0N5 130 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 WASH6PQ9NQA3 447 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 EDDM13A0A1B0GTR0 161 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ANKDD1BA6NHY2 528 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TLR4O00206 839 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 PLPP1O14494 284 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CAPN5O15484 640 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 TBX1O43435 398 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 SLITRK5O94991 958 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 MFN2O95140 757 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CYP17A1P05093 508 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD48-201ENST00000368045 C6P13671 934 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 POU2F1P14859 743 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ENDOUP21128 410 aaKnown RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 CSTF2P33240 577 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD48-201ENST00000368045 DEFA1P59665 94 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 DEFA3P59666 94 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CNTN1Q12860 1018 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 NCF4Q15080 339 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 DUSP7Q16829 419 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CYP27C1Q4G0S4 372 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 C12orf73Q69YU5 71 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 KRT73Q86Y46 540 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 HORMAD2Q8N7B1 307 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 MRPL43Q8N983 215 aaKnown RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 KLHL6Q8WZ60 621 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TMEM19Q96HH6 336 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ABHD8Q96I13 439 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ZNF607Q96SK3 696 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 MS4A8Q9BY19 250 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 KLHL25Q9H0H3 589 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 REV1Q9UBZ9 1251 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ADAM29Q9UKF5 820 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 SNX8Q9Y5X2 465 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
CD48-201ENST00000368045 K7ESM1 405 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 FFAR1O14842 300 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 LZTS3O60299 673 aaPredicted RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 ADH1CP00326 375 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 MYCP01106 439 aaPredicted RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 SCG5P05408 212 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 BCHEP06276 602 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 HSMCR30P0CW71 290 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 CSF2RAP15509 400 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 WEE1P30291 646 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 BSGP35613 385 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 NFE2L1Q14494 772 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 DCST1Q5T197 706 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 CCDC190Q86UF4 302 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 GALNT6Q8NCL4 622 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 GPR32P1Q8NGA4 272 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 WDR36Q8NI36 951 aaKnown RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 TM4SF18Q96CE8 201 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 ZNF354BQ96LW1 612 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 CCDC32Q9BV29 185 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 ZNF717Q9BY31 904 aaPredicted RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 C3orf14Q9HBI5 128 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 POLE4Q9NR33 117 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 ACSS1Q9NUB1 689 aaPredicted RBP13.59□□□□□ -0.23
CD48-201ENST00000368045 ZSCAN32Q9NX65 697 aa13.59□□□□□ -0.23
CD48-201ENST00000368045 PCDHGB6Q9Y5F9 930 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms