RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FAM83EQ2M2I3 478 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PRAMEF9Q5VWM5 478 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 KHDRBS2Q5VWX1 349 aaKnown RBP13.77□□□□□ -0.21
CTSD-202ENST00000367196 ADNP2Q6IQ32 1131 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 GRHL2Q6ISB3 625 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 KLC3Q6P597 504 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 ISCA2Q86U28 154 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 RHEBL1Q8TAI7 183 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 SLC2A12Q8TD20 617 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PTPMT1Q8WUK0 201 aaPredicted RBP13.77□□□□□ -0.21
CTSD-202ENST00000367196 CHTF18Q8WVB6 975 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 LURAP1Q96LR2 239 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 FAM173AQ9BQD7 235 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PHF11Q9UIL8 331 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
CTSD-202ENST00000367196 A0A087X1B8 175 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 WWP2O00308 870 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 FANCGO15287 622 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PRKNO60260 465 aaPredicted RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 UGDHO60701 494 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 LDB3O75112 727 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 OR6B1O95007 311 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 EPORP19235 508 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 BUD31P41223 144 aaPredicted RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 SOX3P41225 446 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PIK3CBP42338 1070 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 MAGEA4P43358 317 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 STT3AP46977 705 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PIK3CGP48736 1102 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PPIAP62937 165 aaKnown RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 TBL3Q12788 808 aaKnown RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 C3P1Q6ZMU1 363 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 ZNF793Q6ZN11 406 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 FGD2Q7Z6J4 655 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 DND1Q8IYX4 353 aaKnown RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 OR2M7Q8NG81 312 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 OR7G3Q8NG95 312 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 NUBPLQ8TB37 319 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 FBXO25Q8TCJ0 367 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 FBF1Q8TES7 1133 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 RND1Q92730 232 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 RGMAQ96B86 450 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 C14orf79Q96F83 325 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 ATOH8Q96SQ7 321 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PELOQ9BRX2 385 aaKnown RBP13.76□□□□□ -0.21
CTSD-202ENST00000367196 SACM1LQ9NTJ5 587 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 ACOT9Q9Y305 439 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 PCDHGA11Q9Y5H2 935 aa13.76□□□□□ -0.21
CTSD-202ENST00000367196 OR14I1A6ND48 311 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 FOXO6A8MYZ6 492 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 UBXN8O00124 270 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 ADAM10O14672 748 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 TGFB1P01137 390 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 C1QAP02745 245 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 P04436 131 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 GFAPP14136 432 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 CAPN3P20807 821 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 CNR1P21554 472 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 CHRNB4P30926 498 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 DDX39BQ13838 428 aaKnown RBP13.75□□□□□ -0.21
CTSD-202ENST00000367196 MPEG1Q2M385 716 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 DEPDC1Q5TB30 811 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 LIPJQ5W064 366 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 CEP128Q6ZU80 1094 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 ACAD11Q709F0 780 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 FAM109AQ8N4B1 249 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 OR52N2Q8NGI0 321 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 TANKQ92844 425 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 RBM18Q96H35 190 aaKnown RBP13.75□□□□□ -0.21
CTSD-202ENST00000367196 TTTY12Q9BZ98 90 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
CTSD-202ENST00000367196 ZDHHC11Q9H8X9 412 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 ACTR8Q9H981 624 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 IGSF5Q9NSI5 407 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 TSC22D4Q9Y3Q8 395 aa13.75□□□□□ -0.21
CTSD-202ENST00000367196 TNPO3Q9Y5L0 923 aaKnown RBP13.75□□□□□ -0.21
CTSD-202ENST00000367196 FIGNL2A6NMB9 653 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 RTCAO00442 366 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 BCKDKO14874 412 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 ZNHIT1O43257 154 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 PHBP35232 272 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 IGLV3-21P80748 117 aaPredicted RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 TNFRSF17Q02223 184 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 SLAMF1Q13291 335 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 ACAP2Q15057 778 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 METTL2BQ6P1Q9 378 aaKnown RBP13.74□□□□□ -0.21
CTSD-202ENST00000367196 FAM47EQ6ZV65 393 aa13.74□□□□□ -0.21
CTSD-202ENST00000367196 NCCRP1Q6ZVX7 275 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms