RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 SORCS2Q96PQ0 1159 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 EBNA1BP2Q99848 306 aaKnown RBP7.49□□□□□ -1.21
YBX3-204ENST00000366290 STRADBQ9C0K7 418 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 FAM96AQ9H5X1 160 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 FAM114A2Q9NRY5 505 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 THSD1Q9NS62 852 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 IL1RAPL1Q9NZN1 696 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 MARCH4Q9P2E8 410 aaPredicted RBP7.49□□□□□ -1.21
YBX3-204ENST00000366290 SLC17A6Q9P2U8 582 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 SLC23A2Q9UGH3 650 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 CHMP2BQ9UQN3 213 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 RPS6KL1Q9Y6S9 549 aa7.49□□□□□ -1.21
YBX3-204ENST00000366290 SPTA1P02549 2419 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 IGLV3-16A0A075B6K0 115 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 A0A087X1B8 175 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 IGHV5-10-1A0A0J9YXX1 117 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 MAGEB16A2A368 324 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LILRA5A6NI73 299 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 GOLGA8KD6RF30 607 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 GOLGA8TH3BQL2 631 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CYR61O00622 381 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 EIF3HO15372 352 aaKnown RBP eCLIP7.48□□□□□ -1.21
YBX3-204ENST00000366290 MTX2O75431 263 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 HNRNPCP07910 306 aaKnown RBP eCLIP7.48□□□□□ -1.21
YBX3-204ENST00000366290 F7P08709 466 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 ZNF7P17097 686 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 PGAM1P18669 254 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 MATN1P21941 496 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LIMK2P53671 638 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 OR1D5P58170 312 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CFHR3Q02985 330 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CFHR1Q03591 330 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CUL1Q13616 776 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LAMB3Q13751 1172 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 EFR3AQ14156 821 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 ERCC6LQ2NKX8 1250 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 GPR33Q49SQ1 333 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 DGAT2L7PQ6IED9 249 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CASC4Q6P4E1 433 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 AFTPHQ6ULP2 937 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 BCDIN3DQ7Z5W3 292 aaKnown RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 SNX20Q7Z614 316 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LDB1Q86U70 411 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 SLC9B2Q86UD5 537 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 PIM3Q86V86 326 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 SERPINA9Q86WD7 417 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 RASGEF1AQ8N9B8 481 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 Q8N9G6 341 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 FBXO36Q8NEA4 188 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 NAT14Q8WUY8 206 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 SNRNP27Q8WVK2 155 aaKnown RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 GLMPQ8WWB7 406 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 SH3KBP1Q96B97 665 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LRRC39Q96DD0 335 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 LINC00615Q96LM1 132 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 DUSP26Q9BV47 211 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 TXLNGYQ9BZA5 131 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 FAM129AQ9BZQ8 928 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 CDCP1Q9H5V8 836 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 ASB8Q9H765 288 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 KCNK6Q9Y257 313 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 MAD1L1Q9Y6D9 718 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 FAM169AQ9Y6X4 670 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
YBX3-204ENST00000366290 COL6A6A6NMZ7 2263 aa7.48□□□□□ -1.21
YBX3-204ENST00000366290 SEC16AO15027 2179 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 SDK2Q58EX2 2172 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TLN1Q9Y490 2541 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 FAM90A20PA6NIJ5 464 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 CYSRT1A8MQ03 144 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 NVLO15381 856 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 RRP8O43159 456 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 VAPBO95292 243 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TTC4O95801 387 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 THRAP10827 490 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 VCLP18206 1134 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 DUSP1P28562 367 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TNFRSF8P28908 595 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 RBMS1P29558 406 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 ALDH4A1P30038 563 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 SSTR1P30872 391 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 MAGEA4P43358 317 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 CTSCP53634 463 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 GPX6P59796 221 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 RPL15P61313 204 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 VSNL1P62760 191 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 PRAMEP78395 509 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TLE3Q04726 772 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 CACNG1Q06432 222 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 FRG1Q14331 258 aaKnown RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 TYSND1Q2T9J0 566 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TBRG1Q3YBR2 411 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 ZNF658BQ4V348 819 aaPredicted RBP7.47□□□□□ -1.21
YBX3-204ENST00000366290 BCL7AQ4VC05 210 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 ZRANB3Q5FWF4 1079 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 SPANXN3Q5MJ09 141 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 TMEM71Q6P5X7 295 aa7.47□□□□□ -1.21
YBX3-204ENST00000366290 CENPUQ71F23 418 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms