RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 HBQ1P09105 142 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 FAM58BPP0C7Q3 252 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 JMJD7P0C870 316 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SMIM10L1P0DMW3 83 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 FGF5P12034 268 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 COX7A2P14406 83 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 DDCP20711 480 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 GPX3P22352 226 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 CALB2P22676 271 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TACR1P25103 407 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TLX1P31314 330 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 KIR3DL1P43629 444 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ALDH9A1P49189 494 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 MNAT1P51948 309 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 POLR2JP52435 117 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 UFM1P61960 85 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 MC2RQ01718 297 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TNFRSF17Q02223 184 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SLAMF1Q13291 335 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 CYLC2Q14093 348 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZSCAN26Q16670 478 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 FAM174BQ3ZCQ3 159 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TIGD2Q4W5G0 525 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 NDUFAF5Q5TEU4 345 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 CEACAM20Q6UY09 585 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 PRSS41Q7RTY9 318 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 GPR180Q86V85 440 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SNX32Q86XE0 403 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ARHGEF39Q8N4T4 335 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 KRTCAP2Q8N6L1 136 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 OR9A4Q8NGU2 314 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 RP9Q8TA86 221 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 PROKR1Q8TCW9 393 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SNRNP27Q8WVK2 155 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 GFM2Q969S9 779 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TESCQ96BS2 214 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 PPCDCQ96CD2 204 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SPDL1Q96EA4 605 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 WBP1Q96G27 269 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZNF764Q96H86 408 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SMIM10Q96HG1 83 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TUBB6Q9BUF5 446 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 NPLQ9BXD5 320 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 SPRTNQ9H040 489 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 REEP4Q9H6H4 257 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 WDR41Q9HAD4 459 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 CLK4Q9HAZ1 481 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 PRDM7Q9NQW5 492 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ZNF71Q9NQZ8 489 aaPredicted RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 ATAD3AQ9NVI7 634 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 OCIAD1Q9NX40 245 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 NDOR1Q9UHB4 597 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 BAIAP2L1Q9UHR4 511 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 TAGLN3Q9UI15 199 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 MRPS33Q9Y291 106 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 MRPS2Q9Y399 296 aaKnown RBP6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 PCDHB3Q9Y5E6 796 aa6.4□□□□□ -1.38
RNU1-55P-201ENST00000365510 CACNA1DQ01668 2161 aa6.4□□□□□ -1.39
RNU1-55P-201ENST00000365510 BOD1L1Q8NFC6 3051 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 FLNCQ14315 2725 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 CCDC187A0A096LP49 1063 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 A0A0A6YYC8 382 aaPredicted RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 C1orf226A1L170 272 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 BLACEA4D250 179 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 C9orf172C9J069 976 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 C9JVG2 144 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 I3L1I5 382 aaPredicted RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 K7EM74 188 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 PLD2O14939 933 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 CFLARO15519 480 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 HNRNPCL1O60812 293 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 ATP5HO75947 161 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 CBX6O95503 412 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 AIFM1O95831 613 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 B3GALT4O96024 378 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 PGRP06401 933 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 SNRPB2P08579 225 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 FURINP09958 794 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 ESRRAP11474 423 aaPredicted RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 COX4I1P13073 169 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 RNH1P13489 461 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 DRD2P14416 443 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 FBLP22087 321 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 ALAS2P22557 587 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 CPN2P22792 545 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 PPP2R1BP30154 601 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 NTSP30990 170 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 S100A3P33764 101 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 GCGRP47871 477 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 UCNP55089 124 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 LIM2P55344 173 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 HNRNPH2P55795 449 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 RAB38P57729 211 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 OLR1P78380 273 aa6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
RNU1-55P-201ENST00000365510 ACTN3Q08043 901 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms