RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF764Q96H86 408 aaPredicted RBP19.49■□□□□ 0.71
SHISA4-201ENST00000362011 CRELD1Q96HD1 420 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 ACTR5Q9H9F9 607 aaPredicted RBP19.49■□□□□ 0.71
SHISA4-201ENST00000362011 WDR41Q9HAD4 459 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 APMAPQ9HDC9 416 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 SLC52A3Q9NQ40 469 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 ATAD3AQ9NVI7 634 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 SH3BP4Q9P0V3 963 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 DHCR7Q9UBM7 475 aaKnown RBP19.49■□□□□ 0.71
SHISA4-201ENST00000362011 LEF1Q9UJU2 399 aaPredicted RBP19.49■□□□□ 0.71
SHISA4-201ENST00000362011 LOXL2Q9Y4K0 774 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 PCDHA9Q9Y5H5 950 aa19.49■□□□□ 0.71
SHISA4-201ENST00000362011 A0A1B0GX78 115 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 HNRNPCL1O60812 293 aaKnown RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 SCRG1O75711 98 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 UNC5CO95185 931 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 HBQ1P09105 142 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 PIM1P11309 404 aaPredicted RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 CCL4P13236 92 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 ALAS2P22557 587 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 TLX1P31314 330 aaPredicted RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 KIR3DL1P43629 444 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 LACTB2Q53H82 288 aaPredicted RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 ZNF385BQ569K4 471 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 CPTPQ5TA50 214 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 C18orf63Q68DL7 685 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 ANKRD26P1Q6NSI1 321 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 RHBDD2Q6NTF9 364 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 PRMT9Q6P2P2 845 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 MSANTD1Q6ZTZ1 278 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 RAB11FIP2Q7L804 512 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 YTHDF3Q7Z739 585 aaKnown RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 TICAM1Q8IUC6 712 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 METTL27Q8N6F8 245 aaPredicted RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 OR8J2Q8NGG1 315 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 OR5T3Q8NGG3 340 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 ADAMTS18Q8TE60 1221 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 VPS33AQ96AX1 596 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 RCN3Q96D15 328 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 COQ8BQ96D53 544 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 OR52E6Q96RD3 313 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 DUSP26Q9BV47 211 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 BHLHE41Q9C0J9 482 aaPredicted RBP19.48■□□□□ 0.71
SHISA4-201ENST00000362011 SLC39A1Q9NY26 324 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 EHD3Q9NZN3 535 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 PCDHB3Q9Y5E6 796 aa19.48■□□□□ 0.71
SHISA4-201ENST00000362011 SEC16AO15027 2179 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 CCDC187A0A096LP49 1063 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 FBP2O00757 339 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 MRASO14807 208 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 CHST10O43529 356 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 DNAJB6O75190 326 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 RNH1P13489 461 aaKnown RBP19.47■□□□□ 0.71
SHISA4-201ENST00000362011 MXRA7P84157 204 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.47■□□□□ 0.71
SHISA4-201ENST00000362011 COQ5Q5HYK3 327 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 OR4F3Q6IEY1 312 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 PWWP2BQ6NUJ5 590 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 NPAS2Q99743 824 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 CTRCQ99895 268 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 EFCAB1Q9HAE3 211 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 FAM120CQ9NX05 1096 aaKnown RBP19.47■□□□□ 0.71
SHISA4-201ENST00000362011 HCN3Q9P1Z3 774 aa19.47■□□□□ 0.71
SHISA4-201ENST00000362011 ASPDHA6ND91 283 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 AIM2O14862 343 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 PRKRAO75569 313 aaKnown RBP19.46■□□□□ 0.71
SHISA4-201ENST00000362011 TIAF1O95411 115 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 LAMP1P11279 417 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 FBLP22087 321 aaKnown RBP19.46■□□□□ 0.71
SHISA4-201ENST00000362011 RAB15P59190 212 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 ACTN3Q08043 901 aaPredicted RBP19.46■□□□□ 0.71
SHISA4-201ENST00000362011 EIF3IQ13347 325 aaKnown RBP19.46■□□□□ 0.71
SHISA4-201ENST00000362011 TLR1Q15399 786 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 SPRED3Q2MJR0 410 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 CEACAM20Q6UY09 585 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 DSELQ8IZU8 1212 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 NATD1Q8N6N6 113 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 FAM47BQ8NA70 645 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 PCYOX1LQ8NBM8 494 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 CLIP3Q96DZ5 547 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 UBL7Q96S82 380 aaPredicted RBP19.46■□□□□ 0.71
SHISA4-201ENST00000362011 CSF3RQ99062 836 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 RMND5AQ9H871 391 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 ZNF304Q9HCX3 659 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 PRDM9Q9NQV7 894 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 MAU2Q9Y6X3 613 aa19.46■□□□□ 0.71
SHISA4-201ENST00000362011 B2RBV5 119 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 ITIH1P19827 911 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 EIF2S3P41091 472 aaKnown RBP19.45■□□□□ 0.7
SHISA4-201ENST00000362011 NUDT2P50583 147 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 RASSF2P50749 326 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 PHC1P78364 1004 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 MAT1AQ00266 395 aaKnown RBP19.45■□□□□ 0.7
SHISA4-201ENST00000362011 MAPKAPK3Q16644 382 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 ARHGAP40Q5TG30 622 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 ANXA8L1Q5VT79 327 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 C1orf189Q5VU69 101 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 OR52E8Q6IFG1 317 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 SLC48A1Q6P1K1 146 aa19.45■□□□□ 0.7
SHISA4-201ENST00000362011 CACTIN-AS1Q8N1I8 211 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms